RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ITPKBP27987 946 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 HOXD12P35452 270 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 TLE2Q04725 743 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 ALKBH1Q13686 389 aaKnown RBP4.36□□□□□ -1.71
SKP1-212ENST00000523966 DLGAP5Q15398 846 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 RUNDC3AQ59EK9 446 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 JAKMIP3Q5VZ66 844 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 LAS2Q8IYD9 372 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 LINC01465Q8N7H1 131 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 PTGR2Q8N8N7 351 aaPredicted RBP4.36□□□□□ -1.71
SKP1-212ENST00000523966 SLC16A11Q8NCK7 471 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 GPR150Q8NGU9 434 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 SLC2A12Q8TD20 617 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 NOC3LQ8WTT2 800 aaKnown RBP4.36□□□□□ -1.71
SKP1-212ENST00000523966 ARRDC3Q96B67 414 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 KTI12Q96EK9 354 aaPredicted RBP4.36□□□□□ -1.71
SKP1-212ENST00000523966 TRMT61AQ96FX7 289 aaKnown RBP4.36□□□□□ -1.71
SKP1-212ENST00000523966 PPP1R10Q96QC0 940 aaKnown RBP4.36□□□□□ -1.71
SKP1-212ENST00000523966 PLEKHA2Q9HB19 425 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 ASIC5Q9NY37 505 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 PI4KBQ9UBF8 816 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 B3GNT3Q9Y2A9 372 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 COPG1Q9Y678 874 aaKnown RBP4.36□□□□□ -1.71
SKP1-212ENST00000523966 CYP3A7-CYP3A51PA0A087WV96 503 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 HEXIM1O94992 359 aaKnown RBP4.35□□□□□ -1.71
SKP1-212ENST00000523966 NUDT3O95989 172 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 AGR2O95994 175 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 MBPP02686 304 aaPredicted RBP4.35□□□□□ -1.71
SKP1-212ENST00000523966 CKMT1AP12532 417 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 PROZP22891 400 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 CYP3A7P24462 503 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 NDUFS1P28331 727 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 TACR3P29371 465 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 PNPLA4P41247 253 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 STAT6P42226 847 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 OAZ1P54368 228 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 FOXL2P58012 376 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 FAM3BP58499 235 aaPredicted RBP4.35□□□□□ -1.71
SKP1-212ENST00000523966 MAPK7Q13164 816 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 TBX2Q13207 712 aaPredicted RBP4.35□□□□□ -1.71
SKP1-212ENST00000523966 DCTN1Q14203 1278 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 KPNB1Q14974 876 aaKnown RBP4.35□□□□□ -1.71
SKP1-212ENST00000523966 ANXA2RQ3ZCQ2 193 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 TMEM119Q4V9L6 283 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 LRRC24Q50LG9 513 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 PRAMEF17Q5VTA0 474 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 DHRS13Q6UX07 377 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 TEX19Q8NA77 164 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 NAXEQ8NCW5 288 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 CLEC4CQ8WTT0 213 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 ASB12Q8WXK4 309 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 STAMQ92783 540 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 KCNJ9Q92806 393 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 KAT2BQ92831 832 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 CELF1Q92879 486 aaKnown RBP4.35□□□□□ -1.71
SKP1-212ENST00000523966 CHFRQ96EP1 664 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 ZNF845Q96IR2 970 aaPredicted RBP4.35□□□□□ -1.71
SKP1-212ENST00000523966 GPR78Q96P69 363 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 ASB2Q96Q27 587 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 SEC62Q99442 399 aaKnown RBP4.35□□□□□ -1.71
SKP1-212ENST00000523966 EIF2AK1Q9BQI3 630 aaKnown RBP4.35□□□□□ -1.71
SKP1-212ENST00000523966 UBA5Q9GZZ9 404 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 PCED1AQ9H1Q7 454 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 ABHD16BQ9H3Z7 469 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 RMI1Q9H9A7 625 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 SEMA4GQ9NTN9 838 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 PDP2Q9P2J9 529 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 PGAP2Q9UHJ9 254 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 IPO11Q9UI26 975 aaKnown RBP4.35□□□□□ -1.71
SKP1-212ENST00000523966 ING1Q9UK53 422 aaPredicted RBP4.35□□□□□ -1.71
SKP1-212ENST00000523966 ADAM21Q9UKJ8 722 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 LZTS1Q9Y250 596 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 DNAJC16Q9Y2G8 782 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 CRYL1Q9Y2S2 319 aa4.35□□□□□ -1.71
SKP1-212ENST00000523966 TCRBV5S1A1TA0A578 114 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 FAM90A20PA6NIJ5 464 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 GRM8O00222 908 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 KLK10O43240 276 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 PROP1O75360 226 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 ALDOCP09972 364 aaKnown RBP4.34□□□□□ -1.71
SKP1-212ENST00000523966 WEE2P0C1S8 567 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 CYP2D6P10635 497 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 CHN1P15882 459 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 CD53P19397 219 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 GSTM2P28161 218 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 SLC37A1P57057 533 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 VAMP2P63027 116 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 CDK18Q07002 472 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 SLC14A1Q13336 389 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 GAB1Q13480 694 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 SLC4A8Q2Y0W8 1093 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 ZNF484Q5JVG2 852 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 ATG16L1Q676U5 607 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 FCRLBQ6BAA4 426 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 ESX1Q8N693 406 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 ENDOVQ8N8Q3 282 aaKnown RBP4.34□□□□□ -1.71
SKP1-212ENST00000523966 LINS1Q8NG48 757 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 PIGKQ92643 395 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 EVI5LQ96CN4 794 aa4.34□□□□□ -1.71
SKP1-212ENST00000523966 REPS1Q96D71 796 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms