RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PDGFRLQ15198 375 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 HADHQ16836 314 aaKnown RBP12.35□□□□□ -0.43
PVT1-215ENST00000522963 SMTNL2Q2TAL5 461 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 ATP13A4Q4VNC1 1196 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 NUGGCQ68CJ6 796 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 Q6ZNB5 142 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 PEX26Q7Z412 305 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 DDX42Q86XP3 938 aaKnown RBP eCLIP12.35□□□□□ -0.43
PVT1-215ENST00000522963 DENND1CQ8IV53 801 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 UNC45BQ8IWX7 931 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 CPA6Q8N4T0 437 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 KRT35Q92764 455 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 FAM83CQ9BQN1 747 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 SNRNP25Q9BV90 132 aaKnown RBP12.35□□□□□ -0.43
PVT1-215ENST00000522963 MAGEB5Q9BZ81 275 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 LTB4R2Q9NPC1 389 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 GPATCH2LQ9NWQ4 482 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 AMFRQ9UKV5 643 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 AGO1Q9UL18 857 aaKnown RBP12.35□□□□□ -0.43
PVT1-215ENST00000522963 FZD10Q9ULW2 581 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 PACSIN2Q9UNF0 486 aaPredicted RBP12.35□□□□□ -0.43
PVT1-215ENST00000522963 MRPS17Q9Y2R5 130 aaKnown RBP12.35□□□□□ -0.43
PVT1-215ENST00000522963 SNX10Q9Y5X0 201 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 KMT2EQ8IZD2 1858 aa12.35□□□□□ -0.43
PVT1-215ENST00000522963 OTOL1A6NHN0 477 aaPredicted RBP12.34□□□□□ -0.43
PVT1-215ENST00000522963 PSTPIP1O43586 416 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 ACSL4O60488 711 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 PAGE1O75459 146 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 RARAP10276 462 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 CTNNA2P26232 953 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 TARSP26639 723 aaKnown RBP12.34□□□□□ -0.43
PVT1-215ENST00000522963 CTHP32929 405 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 CTNNA1P35221 906 aaKnown RBP12.34□□□□□ -0.43
PVT1-215ENST00000522963 MARCKSL1P49006 195 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 HARS2P49590 506 aaKnown RBP12.34□□□□□ -0.43
PVT1-215ENST00000522963 GNG11P61952 73 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 SCAPQ12770 1279 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 PON2Q15165 354 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 CA9Q16790 459 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 ARL13BQ3SXY8 428 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 BOLA3Q53S33 107 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 KCNT1Q5JUK3 1230 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 ERMARDQ5T6L9 678 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 MEI1Q5TIA1 1274 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 PIK3R6Q5UE93 754 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 LRRC38Q5VT99 294 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 NADSYN1Q6IA69 706 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 HTR3DQ70Z44 454 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 RHOT1Q8IXI2 618 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 PYROXD2Q8N2H3 581 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 ATP6V0D2Q8N8Y2 350 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 PJA1Q8NG27 643 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 TEKT4Q8WW24 435 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 HSPH1Q92598 858 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 ATP2A3Q93084 1043 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 BTN2A3PQ96KV6 586 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 DCLK3Q9C098 648 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 C8orf33Q9H7E9 229 aaPredicted RBP12.34□□□□□ -0.43
PVT1-215ENST00000522963 ECT2Q9H8V3 914 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 TRPV5Q9NQA5 729 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 SLC12A6Q9UHW9 1150 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 LSM7Q9UK45 103 aaKnown RBP12.34□□□□□ -0.43
PVT1-215ENST00000522963 AP4E1Q9UPM8 1137 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 HS3ST4Q9Y661 456 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 COL4A2P08572 1712 aa12.34□□□□□ -0.43
PVT1-215ENST00000522963 GOLGA6L7A0A1B0GV03 622 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 E2F8A0AVK6 867 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 SLC9A3R1O14745 358 aaPredicted RBP12.33□□□□□ -0.44
PVT1-215ENST00000522963 DDX3YO15523 660 aaKnown RBP12.33□□□□□ -0.44
PVT1-215ENST00000522963 NFATC1O95644 943 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 LATS1O95835 1130 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 KRT7P08729 469 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 GGCXP38435 758 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 SLC11A2P49281 568 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 AIF1P55008 147 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 NR1H3Q13133 447 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 EML3Q32P44 896 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 MS4A13Q5J8X5 152 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 EFHC2Q5JST6 749 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 TXNDC11Q6PKC3 985 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 NYAP1Q6ZVC0 841 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 POLNQ7Z5Q5 900 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 C14orf80Q86SX3 495 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 RALGPS2Q86X27 583 aaPredicted RBP12.33□□□□□ -0.44
PVT1-215ENST00000522963 BBS7Q8IWZ6 715 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 AZIN2Q96A70 460 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 HES6Q96HZ4 224 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 WDR24Q96S15 920 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 HAPLN3Q96S86 360 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 KCTD15Q96SI1 283 aaPredicted RBP12.33□□□□□ -0.44
PVT1-215ENST00000522963 TLR10Q9BXR5 811 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 SIK2Q9H0K1 926 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 OSBPL2Q9H1P3 480 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 DHX35Q9H5Z1 703 aaKnown RBP12.33□□□□□ -0.44
PVT1-215ENST00000522963 KLHL11Q9NVR0 708 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 PCDHA3Q9Y5H8 950 aa12.33□□□□□ -0.44
PVT1-215ENST00000522963 TRIOO75962 3097 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 CACNA1IQ9P0X4 2223 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 CCDC66A2RUB6 948 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 SHISA7A6NL88 538 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms