RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 USP38Q8NB14 1042 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 KAT6BQ8WYB5 2073 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 ZNF521Q96K83 1311 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 NEUROD6Q96NK8 337 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 HIST1H2AAQ96QV6 131 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 SEC62Q99442 399 aaKnown RBP4.59□□□□□ -1.67
SQLE-204ENST00000520493 PAAF1Q9BRP4 392 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 MLXIPQ9HAP2 919 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 G6PC2Q9NQR9 355 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 PDGFCQ9NRA1 345 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 TMLHEQ9NVH6 421 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 PI4KBQ9UBF8 816 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 LPAR3Q9UBY5 353 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 FEM1BQ9UK73 627 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 MAFFQ9ULX9 164 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 C19orf53Q9UNZ5 99 aaPredicted RBP4.59□□□□□ -1.67
SQLE-204ENST00000520493 CRYL1Q9Y2S2 319 aa4.59□□□□□ -1.67
SQLE-204ENST00000520493 PNMA6EA0A0J9YXQ4 647 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 HMX3A6NHT5 357 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 B9A039 149 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 ZSCAN9O15535 394 aaPredicted RBP4.58□□□□□ -1.68
SQLE-204ENST00000520493 MOSPD3O75425 235 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 MBD4O95243 580 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 LARGE1O95461 756 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 TFRCP02786 760 aaKnown RBP4.58□□□□□ -1.68
SQLE-204ENST00000520493 CKMT1AP12532 417 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 CREB1P16220 341 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 RBL1P28749 1068 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 SETQ01105 290 aaPredicted RBP4.58□□□□□ -1.68
SQLE-204ENST00000520493 TTC22Q5TAA0 569 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 FAAH2Q6GMR7 532 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 RINT1Q6NUQ1 792 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 CFAP161Q6P656 301 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 TMEM65Q6PI78 240 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 ZNF813Q6ZN06 617 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 BCDIN3DQ7Z5W3 292 aaKnown RBP4.58□□□□□ -1.68
SQLE-204ENST00000520493 C2CD5Q86YS7 1000 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 TMTC1Q8IUR5 882 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 TSPYL6Q8N831 410 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 OR1N1Q8NGS0 311 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 SCAMP5Q8TAC9 235 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 SUN3Q8TAQ9 357 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 ASB12Q8WXK4 309 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 OVCA2Q8WZ82 227 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 CPT1BQ92523 772 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 HS6ST2Q96MM7 605 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 TRAPPC9Q96Q05 1148 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 VPS16Q9H269 839 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 JMJD4Q9H9V9 463 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 NOD2Q9HC29 1040 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 NDUFAF4Q9P032 175 aa4.58□□□□□ -1.68
SQLE-204ENST00000520493 FNDC1Q4ZHG4 1894 aaPredicted RBP4.58□□□□□ -1.68
SQLE-204ENST00000520493 FAM90A18PA6NE21 464 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 FAM90A16PA6NEW6 464 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 FAM90A9PA6NNJ1 464 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 FAM90A5PA8MXJ8 464 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 H0Y3Z8 333 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 J3KTA2 159 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 PPEF2O14830 753 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 ZNF500O60304 480 aaPredicted RBP4.57□□□□□ -1.68
SQLE-204ENST00000520493 MT-CO3P00414 261 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 IGKV2-30P06310 120 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 FAM90A15PP0C7V4 464 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 FAM90A14PP0C7W9 464 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 HOXB6P17509 224 aaKnown RBP4.57□□□□□ -1.68
SQLE-204ENST00000520493 ELF1P32519 619 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 CCT4P50991 539 aaKnown RBP4.57□□□□□ -1.68
SQLE-204ENST00000520493 COPB1P53618 953 aaKnown RBP4.57□□□□□ -1.68
SQLE-204ENST00000520493 TIRAPP58753 221 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 UBE3AQ05086 875 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 G3BP1Q13283 466 aaKnown RBP eCLIP4.57□□□□□ -1.68
SQLE-204ENST00000520493 TRPC3Q13507 836 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 ACOX1Q15067 660 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 SMAD1Q15797 465 aaKnown RBP4.57□□□□□ -1.68
SQLE-204ENST00000520493 TBRG1Q3YBR2 411 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 NAA35Q5VZE5 725 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 BBS12Q6ZW61 710 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 TRABD2AQ86V40 505 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 C16orf71Q8IYS4 520 aaPredicted RBP4.57□□□□□ -1.68
SQLE-204ENST00000520493 TMEM57Q8N5G2 664 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 PIGOQ8TEQ8 1089 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 MAELQ96JY0 434 aaKnown RBP4.57□□□□□ -1.68
SQLE-204ENST00000520493 EFHD1Q9BUP0 239 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 SLC26A6Q9BXS9 759 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 TAF1DQ9H5J8 278 aaPredicted RBP4.57□□□□□ -1.68
SQLE-204ENST00000520493 UBN1Q9NPG3 1134 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 KLHL13Q9P2N7 655 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 MGAT4CQ9UBM8 478 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 NKX1-2Q9UD57 310 aaPredicted RBP4.57□□□□□ -1.68
SQLE-204ENST00000520493 STEAP1Q9UHE8 339 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 DAPP1Q9UN19 280 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 RABGAP1Q9Y3P9 1069 aa4.57□□□□□ -1.68
SQLE-204ENST00000520493 TCRBV5S1A1TA0A578 114 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 GXYLT2A0PJZ3 443 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 SAC3D1A6NKF1 404 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 CBFA2T3O75081 653 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 TAF5LO75529 589 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 BCAR3O75815 825 aa4.56□□□□□ -1.68
SQLE-204ENST00000520493 BAIAP3O94812 1187 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms