RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 RIMS3Q9UJD0 308 aa12.71□□□□□ -0.38
PCM1-203ENST00000517545 OGTO15294 1046 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 AMHP03971 560 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 MYL4P12829 197 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 HARS2P49590 506 aaKnown RBP12.7□□□□□ -0.38
PCM1-203ENST00000517545 RGS7P49802 495 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 FSTL1Q12841 308 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 STILQ15468 1287 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 CCDC14Q49A88 953 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 STXBP5Q5T5C0 1151 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 ILDR2Q71H61 639 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 NLGN1Q8N2Q7 840 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 NSUN6Q8TEA1 469 aaKnown RBP12.7□□□□□ -0.38
PCM1-203ENST00000517545 USP13Q92995 863 aaPredicted RBP12.7□□□□□ -0.38
PCM1-203ENST00000517545 ATP2A3Q93084 1043 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 CDRT15Q96T59 188 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 SNRNP25Q9BV90 132 aaKnown RBP12.7□□□□□ -0.38
PCM1-203ENST00000517545 WDR55Q9H6Y2 383 aaPredicted RBP12.7□□□□□ -0.38
PCM1-203ENST00000517545 STK39Q9UEW8 545 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 SIX4Q9UIU6 781 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 MAFBQ9Y5Q3 323 aaPredicted RBP12.7□□□□□ -0.38
PCM1-203ENST00000517545 NEMP1O14524 444 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 TNFAIP8O95379 198 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 TGM2P21980 687 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 GRK2P25098 689 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 EMP3P54852 163 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 MS4A2Q01362 244 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 ADGRE1Q14246 886 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 FLOT2Q14254 428 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 DBN1Q16643 649 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 RARS2Q5T160 578 aaKnown RBP12.7□□□□□ -0.38
PCM1-203ENST00000517545 SLC9A4Q6AI14 798 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 SNX32Q86XE0 403 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 MAP7D3Q8IWC1 876 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 PLD6Q8N2A8 252 aaKnown RBP12.7□□□□□ -0.38
PCM1-203ENST00000517545 ACO2Q99798 780 aaKnown RBP12.7□□□□□ -0.38
PCM1-203ENST00000517545 PKP2Q99959 881 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 Q9H521 79 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 DMTF1Q9Y222 760 aa12.7□□□□□ -0.38
PCM1-203ENST00000517545 STX16-NPEPL1H3BU86 382 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 CFLARO15519 480 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 TFE3P19532 575 aaPredicted RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 CYP3A5P20815 502 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 ZNF667Q5HYK9 610 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 SH2D4BQ5SQS7 431 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 SNRNP48Q6IEG0 339 aaKnown RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 DUS1LQ6P1R4 473 aaKnown RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 XRRA1Q6P2D8 792 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 EPGNQ6UW88 154 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 ZPBP2Q6X784 338 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 AHI1Q8N157 1196 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 ACMSDQ8TDX5 336 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 MRPL4Q9BYD3 311 aaKnown RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 ZNF696Q9H7X3 374 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 MTMR10Q9NXD2 777 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 DCDC2Q9UHG0 476 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 RAB26Q9ULW5 256 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 SH3BP1Q9Y3L3 701 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 MFHAS1Q9Y4C4 1052 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 RPS6KL1Q9Y6S9 549 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 MYO18AQ92614 2054 aaKnown RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 STRNO43815 780 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 TNNC2P02585 160 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 ERVK-10P10266 1014 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 IMPDH2P12268 514 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 CPA3P15088 417 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 CNTFP26441 200 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 TYK2P29597 1187 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 GRM1Q13255 1194 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 TMED1Q13445 227 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 KLC3Q6P597 504 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 RSBN1LQ6PCB5 846 aaPredicted RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 TICAM1Q8IUC6 712 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 DSELQ8IZU8 1212 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 KCNN1Q92952 543 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 ZFRQ96KR1 1074 aaKnown RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 HEXIM2Q96MH2 286 aaKnown RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 CDH19Q9H159 772 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 LIN28AQ9H9Z2 209 aaKnown RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 AFG3L2Q9Y4W6 797 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 SPATA31C2B4DYI2 1134 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 TPSB2P20231 275 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 ACAT1P24752 427 aaKnown RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 MGAT1P26572 445 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 ABCG1P45844 678 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 GTF2A2P52657 109 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 ATXN1P54253 815 aaKnown RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 ADARP55265 1226 aaKnown RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 APOFQ13790 326 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 TPSAB1Q15661 275 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 FSCBQ5H9T9 825 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 MAP1SQ66K74 1059 aaPredicted RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 KCNT2Q6UVM3 1135 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 ZNF410Q86VK4 478 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 BHLHE22Q8NFJ8 381 aaPredicted RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 SNRNP27Q8WVK2 155 aaKnown RBP12.69□□□□□ -0.38
PCM1-203ENST00000517545 TMEM176AQ96HP8 235 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 BCO2Q9BYV7 579 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 CEP41Q9BYV8 373 aa12.69□□□□□ -0.38
PCM1-203ENST00000517545 PGAP2Q9UHJ9 254 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms