RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PRR33A8MZF0 331 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 PI4K2BG5E9Z4 385 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 CES2O00748 559 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 CHADO15335 359 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 IRF1P10914 325 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 PRLRP16471 622 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 PSMC3P17980 439 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 TACR2P21452 398 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 RWDD2BP57060 319 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 GNG11P61952 73 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 AUHQ13825 339 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 PDGFRLQ15198 375 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 PARM1Q6UWI2 310 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 ADHFE1Q8IWW8 467 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 BBS7Q8IWZ6 715 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 RCOR2Q8IZ40 523 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 KRT35Q92764 455 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 FGF14Q92915 247 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 FAF2Q96CS3 445 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 RBM41Q96IZ5 413 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 ZNF670Q9BS34 389 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 CARD9Q9H257 536 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 ZWILCHQ9H900 591 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 PCDH18Q9HCL0 1135 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 TRPV5Q9NQA5 729 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 XPO7Q9UIA9 1087 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 NEU3Q9UQ49 428 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 EFR3BQ9Y2G0 817 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 HYOU1Q9Y4L1 999 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 MYOFQ9NZM1 2061 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 TICRRQ7Z2Z1 1910 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 C19orf67A6NJJ6 358 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 WASH4PA8MWX3 477 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 F5H5T6 163 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 FGF10O15520 208 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 ZNF500O60304 480 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 ZRANB2O95218 330 aaKnown RBP eCLIP12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 MOCS2O96007 188 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 IL9P15248 144 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 KDELR1P24390 212 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 IL4RP24394 825 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 SLC6A4P31645 630 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 SSR1P43307 286 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 MARCKSL1P49006 195 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 DPYSL3Q14195 570 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 RPS6KA1Q15418 735 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 PPP2R5EQ16537 467 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 CA9Q16790 459 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 SMTNL2Q2TAL5 461 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 EML3Q32P44 896 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 ATP13A4Q4VNC1 1196 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 KCNT1Q5JUK3 1230 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 PAPD7Q5XG87 772 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 FBXL22Q6P050 247 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 ADGRG2Q8IZP9 1017 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 ALG3Q92685 438 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 ATP2A3Q93084 1043 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 WDR24Q96S15 920 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 KCTD15Q96SI1 283 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 EPAS1Q99814 870 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 DHX35Q9H5Z1 703 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 TMPRSS4Q9NRS4 437 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 DONSONQ9NYP3 566 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 NUMBLQ9Y6R0 609 aa12.37□□□□□ -0.43
PDLIM5-220ENST00000514830 E9PAM4 449 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 FAM72CH0Y354 149 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 H3BRJ5 948 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 ARNTLO00327 626 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 LRIG2O94898 1065 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 NFATC1O95644 943 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 PENKP01210 267 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 ARL4AP40617 200 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 ZP2Q05996 745 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 DPYSQ14117 519 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 MPPE1Q53F39 396 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 RABGAP1LQ5R372 815 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 FAM72AQ5TYM5 149 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 RAP1GAP2Q684P5 730 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 FAM72DQ6L9T8 149 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 LRRC31Q6UY01 552 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 CHST9Q7L1S5 443 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 CHSY1Q86X52 802 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 FAM72BQ86X60 149 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 GJD3Q8N144 294 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 ZNF557Q8N988 423 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 KCTD6Q8NC69 237 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 HJURPQ8NCD3 748 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 RAPGEF5Q92565 580 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 HSPH1Q92598 858 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 IRF7Q92985 503 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 TBC1D31Q96DN5 1066 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 PRICKLE1Q96MT3 831 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 NAPGQ99747 312 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 KXD1Q9BQD3 176 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 TRMT61BQ9BVS5 477 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 PLA2G2FQ9BZM2 168 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 SIK2Q9H0K1 926 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 KCNH6Q9H252 994 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 KCNK12Q9HB15 430 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms