RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 WNT6Q9Y6F9 365 aa7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 MUC22E2RYF6 1773 aaPredicted RBP7.86□□□□□ -1.15
HMGXB3-204ENST00000513318 MACROD2A1Z1Q3 448 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 TYW5A2RUC4 315 aaKnown RBP7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 F5H5T6 163 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 ARNTLO00327 626 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 SCAMP3O14828 347 aaKnown RBP7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 BUB1O43683 1085 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 BUB1BO60566 1050 aaPredicted RBP7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 PAGE1O75459 146 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 ADH1CP00326 375 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 MIPP30301 263 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 ADRA1BP35368 520 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 SLC1A1P43005 524 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 NAP1L1P55209 391 aaKnown RBP7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 PFKPQ01813 784 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 NR1H3Q13133 447 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 RUNX3Q13761 415 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 HADHQ16836 314 aaKnown RBP7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 RAB6CQ53S08 254 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 FAM133BQ5BKY9 247 aaKnown RBP7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 MS4A13Q5J8X5 152 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 EFHC2Q5JST6 749 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 TRIM68Q6AZZ1 485 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 SCYL2Q6P3W7 929 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 BRICD5Q6PL45 260 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 SLFN11Q7Z7L1 901 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 CHSY1Q86X52 802 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 RNF135Q8IUD6 432 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 PSTKQ8IV42 348 aaKnown RBP7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 RNF10Q8N5U6 811 aaKnown RBP7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 ARFGAP1Q8N6T3 406 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 CCDC185Q8N715 623 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 TPCN2Q8NHX9 752 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 CSGALNACT1Q8TDX6 532 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 ZFYVE19Q96K21 471 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 HAPLN3Q96S86 360 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 PEBP4Q96S96 227 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 UHRF1Q96T88 793 aaPredicted RBP7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 SNRNP25Q9BV90 132 aaKnown RBP7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 RAB6CQ9H0N0 254 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 EBF3Q9H4W6 596 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 ECT2Q9H8V3 914 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 HPS4Q9NQG7 708 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 SLC2A4RGQ9NR83 387 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 SPHK2Q9NRA0 654 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 XPO7Q9UIA9 1087 aaKnown RBP7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 SALL4Q9UJQ4 1053 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 FZD10Q9ULW2 581 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 AP4E1Q9UPM8 1137 aa7.85□□□□□ -1.15
HMGXB3-204ENST00000513318 A0A0U1RQJ8 604 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 GOLGA6L9A6NEM1 432 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 TMEM110-MUSTN1A8MSY1 372 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 I6L893 689 aaPredicted RBP7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 GFRA2O00451 464 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 ZSCAN12O43309 604 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 NARSO43776 548 aaKnown RBP7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 SPOPO43791 374 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 CYBBP04839 570 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 CYP17A1P05093 508 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 KRT7P08729 469 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 ARSAP15289 507 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 TACR2P21452 398 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 SLC6A4P31645 630 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 SSR1P43307 286 aaKnown RBP7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 ZNF135P52742 658 aaPredicted RBP7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 VCPP55072 806 aaKnown RBP7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 NRG1Q02297 640 aaPredicted RBP7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 SLC25A11Q02978 314 aaKnown RBP7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 GAD2Q05329 585 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 DHCR24Q15392 516 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 ITPRIPL2Q3MIP1 535 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 MPPE1Q53F39 396 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 RABGAP1LQ5R372 815 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 LY6G5CQ5SRR4 150 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 MPP7Q5T2T1 576 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 ERMARDQ5T6L9 678 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 PIK3R6Q5UE93 754 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 TTC39BQ5VTQ0 682 aaPredicted RBP7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 DAB2IPQ5VWQ8 1189 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 RAP1GAP2Q684P5 730 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 NADSYN1Q6IA69 706 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 C1orf228Q6PIY5 440 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 CYP4V2Q6ZWL3 525 aaPredicted RBP7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 POLNQ7Z5Q5 900 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 DAAM2Q86T65 1068 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 UBALD2Q8IYN6 164 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 ADGRG2Q8IZP9 1017 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 SYCE1Q8N0S2 351 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 HJURPQ8NCD3 748 aaPredicted RBP7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 TEKT4Q8WW24 435 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 ATRIPQ8WXE1 791 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 MSANTD3Q96H12 275 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 C1orf74Q96LT6 269 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 PRMT1Q99873 361 aaKnown RBP7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 BBS2Q9BXC9 721 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 OSBPL2Q9H1P3 480 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 LINC00597Q9H2U6 94 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 LZTFL1Q9NQ48 299 aa7.84□□□□□ -1.15
HMGXB3-204ENST00000513318 ANLNQ9NQW6 1124 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms