RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 PPP6R3Q5H9R7 873 aaPredicted RBP12.95□□□□□ -0.34
PDPN-210ENST00000513143 FAM72AQ5TYM5 149 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 MANEALQ5VSG8 457 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 RAP1GAP2Q684P5 730 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 TANGO2Q6ICL3 276 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 FAM72DQ6L9T8 149 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 MFSD7Q6UXD7 560 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 SPOCD1Q6ZMY3 1216 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 C14orf80Q86SX3 495 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 FAM72BQ86X60 149 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 BBS7Q8IWZ6 715 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 ZNF683Q8IZ20 524 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 CPXM2Q8N436 756 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 BPIFB1Q8TDL5 484 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 E2F7Q96AV8 911 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
PDPN-210ENST00000513143 ELSPBP1Q96BH3 223 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 FAF2Q96CS3 445 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 PBKQ96KB5 322 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 OSBPL9Q96SU4 736 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 PSMB7Q99436 277 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 EPAS1Q99814 870 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 DDX50Q9BQ39 737 aaKnown RBP12.95□□□□□ -0.34
PDPN-210ENST00000513143 ZNF670Q9BS34 389 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 PHF7Q9BWX1 381 aaPredicted RBP12.95□□□□□ -0.34
PDPN-210ENST00000513143 CWC15Q9P013 229 aaKnown RBP12.95□□□□□ -0.34
PDPN-210ENST00000513143 SAR1BQ9Y6B6 198 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 MYOFQ9NZM1 2061 aa12.95□□□□□ -0.34
PDPN-210ENST00000513143 IGLV3-10A0A075B6K4 115 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 DRGXA6NNA5 263 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 HEPACAM2A8MVW5 462 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 E9PAM4 449 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 H3BRJ5 948 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 EEF2KO00418 725 aaKnown RBP12.94□□□□□ -0.34
PDPN-210ENST00000513143 GFRA2O00451 464 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 CREB3O43889 395 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 LRIG2O94898 1065 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 GOT1P17174 413 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 TACR2P21452 398 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 HOXC13P31276 330 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 SLC6A4P31645 630 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 CXCR5P32302 372 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 PTPN7P35236 360 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 CHKAP35790 457 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 GGCXP38435 758 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 ARL4AP40617 200 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 CETN2P41208 172 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 ZNF211Q13398 564 aaPredicted RBP12.94□□□□□ -0.34
PDPN-210ENST00000513143 PPP2R5EQ16537 467 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 C5orf22Q49AR2 442 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 TFDP3Q5H9I0 405 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 FBXL22Q6P050 247 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 AADACL2Q6P093 401 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 LRRC31Q6UY01 552 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 ANKS1BQ7Z6G8 1248 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 CHSY1Q86X52 802 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 TTC16Q8NEE8 873 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 KIF18AQ8NI77 898 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 ZNF592Q92610 1267 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 OTUB2Q96DC9 234 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 CALN1Q9BXU9 219 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 TBC1D14Q9P2M4 693 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 PPARGC1AQ9UBK2 798 aaKnown RBP12.94□□□□□ -0.34
PDPN-210ENST00000513143 NEU3Q9UQ49 428 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 EFR3BQ9Y2G0 817 aa12.94□□□□□ -0.34
PDPN-210ENST00000513143 hCG_1818297A0A087WSY0 165 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 ANHXE9PGG2 379 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 F5H5T6 163 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 SLC9A3R1O14745 358 aaPredicted RBP12.93□□□□□ -0.34
PDPN-210ENST00000513143 SCAMP3O14828 347 aaKnown RBP12.93□□□□□ -0.34
PDPN-210ENST00000513143 SRGAP2O75044 1071 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 ECI2O75521 394 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 TPI1P60174 286 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 MMRN1Q13201 1228 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 DPYSQ14117 519 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 ANKRD20A8PQ5CZ79 823 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 SEL1L2Q5TEA6 688 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 PTCRAQ6ISU1 281 aaPredicted RBP12.93□□□□□ -0.34
PDPN-210ENST00000513143 RFWD3Q6PCD5 774 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 PARM1Q6UWI2 310 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 VITQ6UXI7 678 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 RFX8Q6ZV50 586 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 MTSS1LQ765P7 747 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 CCDC50Q8IVM0 306 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 MFSD6LQ8IWD5 586 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 LGI2Q8N0V4 545 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 PLCD3Q8N3E9 789 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 TDRD5Q8NAT2 981 aaKnown RBP12.93□□□□□ -0.34
PDPN-210ENST00000513143 COG1Q8WTW3 980 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 OSCP1Q8WVF1 389 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 FGF14Q92915 247 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 TBC1D31Q96DN5 1066 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 MYEOVQ96EZ4 313 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 CSPG4P5Q96PW8 444 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 RNF157Q96PX1 679 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 OSBPL8Q9BZF1 889 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 VANGL2Q9ULK5 521 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 FAM50BQ9Y247 325 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 NR2E1Q9Y466 385 aa12.93□□□□□ -0.34
PDPN-210ENST00000513143 SPTBN5Q9NRC6 3674 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms