RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 SMRP1Q8NCR6 262 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 FAM71BQ8TC56 605 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 ACTRT1Q8TDG2 376 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 COG1Q8WTW3 980 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 FGF13Q92913 245 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 SMARCD2Q92925 531 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 MSLNLQ96KJ4 702 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 ASB2Q96Q27 587 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 KCTD15Q96SI1 283 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-204ENST00000512707 S1PR5Q9H228 398 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 RETREG1Q9H6L5 497 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 CATSPERBQ9H7T0 1116 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 UBE2ZQ9H832 354 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-204ENST00000512707 HOMER3Q9NSC5 361 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 THG1LQ9NWX6 298 aaKnown RBP11.22□□□□□ -0.61
PFDN1-204ENST00000512707 TBC1D14Q9P2M4 693 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 TTC7AQ9ULT0 858 aaPredicted RBP11.22□□□□□ -0.61
PFDN1-204ENST00000512707 FAM50BQ9Y247 325 aa11.22□□□□□ -0.61
PFDN1-204ENST00000512707 TCF20Q9UGU0 1960 aaKnown RBP11.21□□□□□ -0.61
PFDN1-204ENST00000512707 hCG_1818297A0A087WSY0 165 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 E9PAM4 449 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 APOL1O14791 398 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 FANCGO15287 622 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 CYBBP04839 570 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 TCF3P15923 654 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 TACR2P21452 398 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 KCNA5P22460 613 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 SERPINB6P35237 376 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 DLX2Q07687 328 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-204ENST00000512707 CA9Q16790 459 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 ANKRD20A8PQ5CZ79 823 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 MS4A13Q5J8X5 152 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 RAP1GAP2Q684P5 730 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 TMCO3Q6UWJ1 677 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 HTR3DQ70Z44 454 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 BZW1Q7L1Q6 419 aaKnown RBP11.21□□□□□ -0.61
PFDN1-204ENST00000512707 SLC13A5Q86YT5 568 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-204ENST00000512707 ARID3BQ8IVW6 561 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-204ENST00000512707 PYROXD2Q8N2H3 581 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 RASGEF1CQ8N431 466 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 CEP112Q8N8E3 955 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 ADAMTS19Q8TE59 1207 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 PPM1EQ8WY54 764 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 USP13Q92995 863 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-204ENST00000512707 HLA-CQ95604 372 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 OTUB2Q96DC9 234 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 RPGRIP1Q96KN7 1286 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 ZFRQ96KR1 1074 aaKnown RBP11.21□□□□□ -0.61
PFDN1-204ENST00000512707 RPRD1AQ96P16 312 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-204ENST00000512707 CSPG4P5Q96PW8 444 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 RNF157Q96PX1 679 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 HEMGNQ9BXL5 484 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 OBP2AQ9NY56 170 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 AGO1Q9UL18 857 aaKnown RBP11.21□□□□□ -0.61
PFDN1-204ENST00000512707 USP15Q9Y4E8 981 aaPredicted RBP11.21□□□□□ -0.61
PFDN1-204ENST00000512707 MRFAP1Q9Y605 127 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 HS3ST4Q9Y661 456 aa11.21□□□□□ -0.61
PFDN1-204ENST00000512707 OBSL1O75147 1896 aa11.21□□□□□ -0.62
PFDN1-204ENST00000512707 REV3LO60673 3130 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 PRRC2BQ5JSZ5 2229 aaKnown RBP11.2□□□□□ -0.62
PFDN1-204ENST00000512707 C3orf70A6NLC5 250 aaPredicted RBP11.2□□□□□ -0.62
PFDN1-204ENST00000512707 KRIT1O00522 736 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 ZNF185O15231 689 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 CST8O60676 142 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 ZNF189O75820 626 aaPredicted RBP11.2□□□□□ -0.62
PFDN1-204ENST00000512707 LRIG2O94898 1065 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 PRAMEF12O95522 483 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 CD48P09326 243 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 GOT1P17174 413 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 TGM2P21980 687 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 LTBRP36941 435 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 ARSEP51690 589 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 DYNLT1P63172 113 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 USP4Q13107 963 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 SEMA3BQ13214 749 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 SMAD4Q13485 552 aaKnown RBP11.2□□□□□ -0.62
PFDN1-204ENST00000512707 AUHQ13825 339 aaKnown RBP11.2□□□□□ -0.62
PFDN1-204ENST00000512707 PIK3R6Q5UE93 754 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 BBS12Q6ZW61 710 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 MTSS1LQ765P7 747 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 CREG2Q8IUH2 290 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 YAF2Q8IY57 180 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 LGI2Q8N0V4 545 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 HJURPQ8NCD3 748 aaPredicted RBP11.2□□□□□ -0.62
PFDN1-204ENST00000512707 TSC1Q92574 1164 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 P3H4Q92791 437 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 FAF2Q96CS3 445 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 ASB16Q96NS5 453 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 FERMT1Q9BQL6 677 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 FRMD8P1Q9BZ68 369 aaPredicted RBP11.2□□□□□ -0.62
PFDN1-204ENST00000512707 ZYG11BQ9C0D3 744 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 SMG9Q9H0W8 520 aaKnown RBP11.2□□□□□ -0.62
PFDN1-204ENST00000512707 TRPV4Q9HBA0 871 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 ZFP14Q9HCL3 533 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 TMPRSS4Q9NRS4 437 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 CWC15Q9P013 229 aaKnown RBP11.2□□□□□ -0.62
PFDN1-204ENST00000512707 PPARGC1AQ9UBK2 798 aaKnown RBP11.2□□□□□ -0.62
PFDN1-204ENST00000512707 STOML2Q9UJZ1 356 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 VANGL2Q9ULK5 521 aa11.2□□□□□ -0.62
PFDN1-204ENST00000512707 CTAGE15A4D2H0 777 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms