RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 DCDC2Q9UHG0 476 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 DPYSL4O14531 572 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 GABBR2O75899 941 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 STAG3L1P0CL83 205 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 ERVK-10P10266 1014 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 FDFT1P37268 417 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 RANBP1P43487 201 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 HARS2P49590 506 aaKnown RBP13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 KLF10Q13118 480 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 OGFRL1Q5TC84 451 aaPredicted RBP13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 LCLAT1Q6UWP7 414 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 NAPRTQ6XQN6 538 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 SDCCAG8Q86SQ7 713 aaPredicted RBP13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 PLD6Q8N2A8 252 aaKnown RBP13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 ARNTL2Q8WYA1 636 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 ATP2A3Q93084 1043 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 MOCOSQ96EN8 888 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 DCUN1D1Q96GG9 259 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 ATXN7L3BQ96GX2 97 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 PPP1R16BQ96T49 567 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 COG4Q9H9E3 785 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 ACSS2Q9NR19 701 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 UBAP1Q9NZ09 502 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 SPDYE16A6NNV3 312 aaPredicted RBP13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 IL18RAPO95256 599 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 GRK2P25098 689 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 MSX2P35548 267 aaPredicted RBP13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 CLCN3P51790 818 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 TTLL12Q14166 644 aaPredicted RBP13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 TBC1D25Q3MII6 688 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 PABPC1LQ4VXU2 614 aaKnown RBP13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 LRRC23Q53EV4 343 aaPredicted RBP13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 PPP1R26Q5T8A7 1209 aaPredicted RBP13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 MAP3K21Q5TCX8 1036 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 HEATR6Q6AI08 1181 aaKnown RBP13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 TTC30AQ86WT1 665 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 CLEC4CQ8WTT0 213 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 MPP4Q96JB8 637 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 OR52B2Q96RD2 323 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 GCOM2Q9BZD3 368 aaPredicted RBP13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 C2orf40Q9H1Z8 148 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 DTLQ9NZJ0 730 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 HESX1Q9UBX0 185 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 BARX2Q9UMQ3 279 aaPredicted RBP13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 ARHGAP26Q9UNA1 814 aa13.79□□□□□ -0.2
SNCAIP-209ENST00000508017 MYOCOSA0A1B0GUC4 107 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 MDM4O15151 490 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 PAPSS1O43252 624 aaPredicted RBP13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 PMLP29590 882 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 TYK2P29597 1187 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 MLH1P40692 756 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 MBTD1Q05BQ5 628 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 OLIG2Q13516 323 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 GK3PQ14409 553 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 PPM1LQ5SGD2 360 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 CATSPERGQ6ZRH7 1159 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 FAM81AQ8TBF8 368 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 SEPT1Q8WYJ6 367 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 DTNBP1Q96EV8 351 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 DNAJC1Q96KC8 554 aaKnown RBP13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 PPP1R36Q96LQ0 422 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 WRNIP1Q96S55 665 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 KCTD15Q96SI1 283 aaPredicted RBP13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 TBCBQ99426 244 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 LGMNQ99538 433 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 LPIN3Q9BQK8 851 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 CYP3A43Q9HB55 503 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 FAM49BQ9NUQ9 324 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 IRAK4Q9NWZ3 460 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 SYBUQ9NX95 663 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 SSC5DA1L4H1 1573 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 GOLGA8QA0A0J9YX86 632 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 SMIM31A0A1B0GVY4 71 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 GOLGA8OA6NCC3 632 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 GOLGA8NF8WBI6 632 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 AIM2O14862 343 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 VILLO15195 856 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 PEX1O43933 1283 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 FBXO21O94952 628 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 ARIH2O95376 493 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 MYL4P12829 197 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 CPA3P15088 417 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 HSPA1LP34931 641 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 SERPINB5P36952 375 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 ABCG1P45844 678 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 GTF2A2P52657 109 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 INHBCP55103 352 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 SLC6A3Q01959 620 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 NCBP2-AS2Q69YL0 99 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 EPGNQ6UW88 154 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 C4orf22Q6V702 233 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 RBM44Q6ZP01 1051 aaKnown RBP13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 CYS1Q717R9 158 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 PYROXD2Q8N2H3 581 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 PQLC1Q8N2U9 271 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 CDKL2Q92772 493 aa13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 PRICKLE1Q96MT3 831 aaPredicted RBP13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 LENG8Q96PV6 779 aaPredicted RBP13.78□□□□□ -0.2
SNCAIP-209ENST00000508017 CSPG4P5Q96PW8 444 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms