RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 GPR162Q16538 588 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 ZNF484Q5JVG2 852 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 MAP3K21Q5TCX8 1036 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 TMEM88Q6PEY1 159 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 AMIGO2Q86SJ2 522 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 TMTC1Q8IUR5 882 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 ESX1Q8N693 406 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 ANKRD44Q8N8A2 993 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 TEX19Q8NA77 164 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 USP38Q8NB14 1042 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 NAXEQ8NCW5 288 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 ADPRHL1Q8NDY3 354 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 ARRDC3Q96B67 414 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 SARAFQ96BY9 339 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 RBM17Q96I25 401 aaKnown RBP4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 KLK15Q9H2R5 256 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 RMI1Q9H9A7 625 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 PRDM16Q9HAZ2 1276 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 PDE11AQ9HCR9 933 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 WASH6PQ9NQA3 447 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 INSL6Q9Y581 213 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 COPG1Q9Y678 874 aaKnown RBP4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 WNT6Q9Y6F9 365 aa4.54□□□□□ -1.68
HMGB1P28-201ENST00000507778 TISP43B9A030 160 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 UBE2Q2LH0YL09 131 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 PRYO14603 147 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 TSPAN3O60637 253 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 KAT7O95251 611 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 FSHBP01225 129 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 CYP2D6P10635 497 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 IGFBP2P18065 325 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 NDUFS1P28331 727 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 HOXD12P35452 270 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 STAT6P42226 847 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 CCR5P51681 352 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 VAMP2P63027 116 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 KLF10Q13118 480 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 PFKFB3Q16875 520 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 GLE1Q53GS7 698 aaKnown RBP4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 ZNF362Q5T0B9 420 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 CC2D1BQ5T0F9 858 aaKnown RBP4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 INTS11Q5TA45 600 aaKnown RBP4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 RANBP10Q6VN20 620 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 BBS12Q6ZW61 710 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 C16orf71Q8IYS4 520 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 ZNF845Q96IR2 970 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 PPM1MQ96MI6 270 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 PPP1R10Q96QC0 940 aaKnown RBP4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 REEP2Q9BRK0 252 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 HTATIP2Q9BUP3 242 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 TRIM2Q9C040 744 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 MAF1Q9H063 256 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 NUAK2Q9H093 628 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 SFXN1Q9H9B4 322 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 ASNSD1Q9NWL6 643 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 TMEM160Q9NX00 188 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 MAFFQ9ULX9 164 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 RCE1Q9Y256 329 aa4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 SIRT4Q9Y6E7 314 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P28-201ENST00000507778 CCDC196A0A1B0GTZ2 297 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 VWA3AA6NCI4 1184 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 POC1B-GALNT4F8VUJ3 575 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 GRM8O00222 908 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 CYR61O00622 381 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 ENO1P06733 434 aaKnown RBP4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 CHRM5P08912 532 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 TNNT1P13805 278 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 CPA1P15085 419 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 PNPLA4P41247 253 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 ZNF84P51523 738 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 SLC37A1P57057 533 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 CDK18Q07002 472 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 MAPK7Q13164 816 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 G3BP1Q13283 466 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 SLC14A1Q13336 389 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 SLC4A8Q2Y0W8 1093 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 CBWD5Q5RIA9 395 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 SUMO4Q6EEV6 95 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 KIAA1324Q6UXG2 1013 aaKnown RBP4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 ARHGEF25Q86VW2 580 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 GALNT4Q8N4A0 578 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 LINS1Q8NG48 757 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 HVCN1Q96D96 273 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 MPP4Q96JB8 637 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 GPR78Q96P69 363 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 SEC62Q99442 399 aaKnown RBP4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 SENP7Q9BQF6 1050 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 ARHGAP39Q9C0H5 1083 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 SYNPO2LQ9H987 977 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 SEMA4GQ9NTN9 838 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 SERGEFQ9UGK8 458 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 ING1Q9UK53 422 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 DMRT1Q9Y5R6 373 aa4.52□□□□□ -1.69
HMGB1P28-201ENST00000507778 C16orf96A6NNT2 1141 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 SMIM22K7EJ46 135 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 KLK10O43240 276 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 CSF1P09603 554 aa4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 ALDOCP09972 364 aaKnown RBP4.51□□□□□ -1.69
HMGB1P28-201ENST00000507778 ACP5P13686 325 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms