RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 BRMS1LQ5PSV4 323 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 MRNIPQ6NTE8 343 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.69□□□□□ -0.86
NEK1-203ENST00000507142 RPAINQ86UA6 219 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 CCNYL1Q8N7R7 359 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 SNX31Q8N9S9 440 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 ZSWIM2Q8NEG5 633 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 KLHL5Q96PQ7 755 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 OSGEPQ9NPF4 335 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 UBR3Q6ZT12 1888 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 GRID2IPA4D2P6 1211 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 ZSCAN5CA6NGD5 496 aaPredicted RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 SIGLEC16A6NMB1 481 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 RFPL2O75678 378 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 POLBP06746 335 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 ADH5P11766 374 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 TACR2P21452 398 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 STIP1P31948 543 aaKnown RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 MAPK8P45983 427 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 GPR1P46091 355 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 PTK6Q13882 451 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 UGP2Q16851 508 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 UAP1L1Q3KQV9 507 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 B4GALNT4Q76KP1 1039 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 HDDC3Q8N4P3 179 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 TC2NQ8N9U0 490 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 SMG8Q8ND04 991 aaKnown RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 SCAMP5Q8TAC9 235 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 RNF217Q8TC41 542 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 EPS8L1Q8TE68 723 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 MYLIPQ8WY64 445 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 TOP1MTQ969P6 601 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 ACDQ96AP0 544 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 PLD4Q96BZ4 506 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 ZSWIM1Q9BR11 485 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 DDX23Q9BUQ8 820 aaKnown RBP9.69□□□□□ -0.86
NEK1-203ENST00000507142 WNT6Q9Y6F9 365 aa9.69□□□□□ -0.86
NEK1-203ENST00000507142 NBNO60934 754 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 GPR15P49685 360 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 FIGNQ5HY92 759 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 ANKRD20A3Q5VUR7 823 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 IRAK1BP1Q5VVH5 260 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 ANGPTL8Q6UXH0 198 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 OR6K2Q8NGY2 324 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 PRCCQ92733 491 aaPredicted RBP9.68□□□□□ -0.86
NEK1-203ENST00000507142 EXOC2Q96KP1 924 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 TPX2Q9ULW0 747 aaKnown RBP9.68□□□□□ -0.86
NEK1-203ENST00000507142 HBS1LQ9Y450 684 aaKnown RBP9.68□□□□□ -0.86
NEK1-203ENST00000507142 MTMR11A4FU01 709 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 C9IYK1 514 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 ERVK-10P10266 1014 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 AMD1P17707 334 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 NOVP48745 357 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 LIG3P49916 1009 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 INSCQ1MX18 579 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 ACBD5Q5T8D3 534 aaPredicted RBP9.68□□□□□ -0.86
NEK1-203ENST00000507142 SRRM1Q8IYB3 904 aaKnown RBP9.68□□□□□ -0.86
NEK1-203ENST00000507142 IRGQQ8WZA9 623 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 TSPAN17Q96FV3 270 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 HERC2P3Q9BVR0 1158 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 GTPBP2Q9BX10 602 aaKnown RBP9.68□□□□□ -0.86
NEK1-203ENST00000507142 SMG9Q9H0W8 520 aaKnown RBP9.68□□□□□ -0.86
NEK1-203ENST00000507142 ADAM7Q9H2U9 754 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.68□□□□□ -0.86
NEK1-203ENST00000507142 GULP1Q9UBP9 304 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 TFR2Q9UP52 801 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 CLUHO75153 1309 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 ARHGAP10A1A4S6 786 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 FAM187AA6NFU0 413 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 KCNK1O00180 336 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 PHF2O75151 1096 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 GLI1P08151 1106 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 CTSAP10619 480 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 MYOGP15173 224 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 ADSSP30520 456 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 MAP7Q14244 749 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 RBBP5Q15291 538 aaKnown RBP9.68□□□□□ -0.86
NEK1-203ENST00000507142 ARMCX6Q7L4S7 300 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 LRRC8CQ8TDW0 803 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 MS4A14Q96JA4 679 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 EBF3Q9H4W6 596 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 CALCOCO1Q9P1Z2 691 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 AMACRQ9UHK6 382 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 LNPEPQ9UIQ6 1025 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 MYH1P12882 1939 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 COPEO14579 308 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 RFC1P35251 1148 aaPredicted RBP9.68□□□□□ -0.86
NEK1-203ENST00000507142 CCT5P48643 541 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 ZNF143P52747 638 aaPredicted RBP9.68□□□□□ -0.86
NEK1-203ENST00000507142 POU5F1Q01860 360 aaKnown RBP9.68□□□□□ -0.86
NEK1-203ENST00000507142 XRCC4Q13426 336 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 CUL1Q13616 776 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 USP10Q14694 798 aaKnown RBP9.68□□□□□ -0.86
NEK1-203ENST00000507142 FAM71AQ8IYT1 594 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 CCDC3Q9BQI4 270 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 SMARCAL1Q9NZC9 954 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 NFU1Q9UMS0 254 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 NAV1Q8NEY1 1877 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 ANKRD36CQ5JPF3 1778 aa9.68□□□□□ -0.86
NEK1-203ENST00000507142 O00370 1275 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms