RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 MYLKQ15746 1914 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 LRRK1Q38SD2 2015 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 MUC22E2RYF6 1773 aaPredicted RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 hCG_1818297A0A087WSY0 165 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 LRRD1A4D1F6 860 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 GRXCR2A6NFK2 248 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 DRGXA6NNA5 263 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 WASH4PA8MWX3 477 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 PI4K2BG5E9Z4 385 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 FAM72CH0Y354 149 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 MBTPS2O43462 519 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 LRIG2O94898 1065 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 PRAMEF12O95522 483 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 KRT1P04264 644 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 HMBSP08397 361 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 CD48P09326 243 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 LAMP2P13473 410 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 FCARP24071 287 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 CXCR5P32302 372 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 GJC1P36383 396 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 ARL4AP40617 200 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 CETN2P41208 172 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 SLC11A2P49281 568 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 KLF1Q13351 362 aaPredicted RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 SMAD4Q13485 552 aaKnown RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 AUHQ13825 339 aaKnown RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 DPYSQ14117 519 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 CLUL1Q15846 466 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 FAM133BQ5BKY9 247 aaKnown RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 ANKRD20A8PQ5CZ79 823 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 FAM78AQ5JUQ0 283 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 SEL1L2Q5TEA6 688 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 FAM72AQ5TYM5 149 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 RNF43Q68DV7 783 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 SLC9A4Q6AI14 798 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 NADSYN1Q6IA69 706 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 FAM72DQ6L9T8 149 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 AADACL2Q6P093 401 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 GET4Q7L5D6 327 aaPredicted RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 ZNF572Q7Z3I7 529 aaPredicted RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 ANKS1BQ7Z6G8 1248 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 FAM72BQ86X60 149 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 CREG2Q8IUH2 290 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 DENND1CQ8IV53 801 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 RIN3Q8TB24 985 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 ZSCAN18Q8TBC5 510 aaPredicted RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 SH3RF2Q8TEC5 729 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 COG1Q8WTW3 980 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 SMARCD2Q92925 531 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 HLA-CQ95604 372 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 E2F7Q96AV8 911 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 RNF25Q96BH1 459 aaPredicted RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 OTUB2Q96DC9 234 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 RNF157Q96PX1 679 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 MYADMQ96S97 322 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 EPAS1Q99814 870 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 DDX50Q9BQ39 737 aaKnown RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 OSBPL8Q9BZF1 889 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 SLITRK6Q9H5Y7 841 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 GPATCH2LQ9NWQ4 482 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 SMPD4Q9NXE4 827 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 CFAP97Q9P2B7 532 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 TBC1D14Q9P2M4 693 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 EPS15L1Q9UBC2 864 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 XPO7Q9UIA9 1087 aaKnown RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 CDC23Q9UJX2 597 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 LSM7Q9UK45 103 aaKnown RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 AGO1Q9UL18 857 aaKnown RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 USP15Q9Y4E8 981 aaPredicted RBP7.44□□□□□ -1.22
NUP54-204ENST00000506098 CEP192Q8TEP8 1941 aa7.44□□□□□ -1.22
NUP54-204ENST00000506098 XIRP2A4UGR9 3374 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 F5P12259 2224 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 E9PAM4 449 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 H3BRJ5 948 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 EEF2KO00418 725 aaKnown RBP7.43□□□□□ -1.22
NUP54-204ENST00000506098 DCLK1O15075 740 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 ZNF185O15231 689 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 FGF10O15520 208 aaPredicted RBP7.43□□□□□ -1.22
NUP54-204ENST00000506098 CEP104O60308 925 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 SRGAP2O75044 1071 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 URI1O94763 535 aaPredicted RBP7.43□□□□□ -1.22
NUP54-204ENST00000506098 MOCS2O96007 188 aaPredicted RBP7.43□□□□□ -1.22
NUP54-204ENST00000506098 IRF1P10914 325 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 GOT1P17174 413 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 TACR2P21452 398 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 SLC6A4P31645 630 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 CHKAP35790 457 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 MMRN1Q13201 1228 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 ZNF211Q13398 564 aaPredicted RBP7.43□□□□□ -1.22
NUP54-204ENST00000506098 TFDP2Q14188 446 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 KRT81Q14533 505 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 SIX1Q15475 284 aaPredicted RBP7.43□□□□□ -1.22
NUP54-204ENST00000506098 CCDC85BQ15834 202 aaPredicted RBP7.43□□□□□ -1.22
NUP54-204ENST00000506098 LEXMQ3ZCV2 418 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 ODF2Q5BJF6 829 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 PPP6R3Q5H9R7 873 aaPredicted RBP7.43□□□□□ -1.22
NUP54-204ENST00000506098 MPP7Q5T2T1 576 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 ZFYVE27Q5T4F4 411 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 FBXL22Q6P050 247 aa7.43□□□□□ -1.22
NUP54-204ENST00000506098 EP400NLQ6ZTU2 488 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms