RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 IGLV3-10A0A075B6K4 115 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 HIDE1A8MVS5 230 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 GRXCR1A8MXD5 290 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 E9PAM4 449 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 ZNF197O14709 1029 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 COCHO43405 550 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 CLASP2O75122 1294 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 OLFM2O95897 454 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 TBX18O95935 607 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 MOCS2O96007 188 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 MYOGP15173 224 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 PECAM1P16284 738 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 RHOQP17081 205 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 PTPN2P17706 415 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 DNAJB1P25685 340 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 GABRR2P28476 465 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 ADCY8P40145 1251 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 EPHA5P54756 1037 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 MS4A13Q5J8X5 152 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 SPDYCQ5MJ68 293 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 BEND6Q5SZJ8 279 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 TTC39BQ5VTQ0 682 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 HEATR6Q6AI08 1181 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 RWDD4Q6NW29 188 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 CASKIN2Q8WXE0 1202 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 CAVIN3Q969G5 261 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 OLFM3Q96PB7 478 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 QKIQ96PU8 341 aaKnown RBP eCLIP8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 FMO2Q99518 471 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 VAT1Q99536 393 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 TRIM51Q9BSJ1 452 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 TMEM121Q9BTD3 319 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 KLF16Q9BXK1 252 aaPredicted RBP8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 PBX4Q9BYU1 374 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 ZYG11BQ9C0D3 744 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 SIK2Q9H0K1 926 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 ACBD3Q9H3P7 528 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 ANLNQ9NQW6 1124 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 MAN1C1Q9NR34 630 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 DZANK1Q9NVP4 752 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 DTLQ9NZJ0 730 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 LSM7Q9UK45 103 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 NUDT5Q9UKK9 219 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 YBX2Q9Y2T7 364 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 NEU2Q9Y3R4 380 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 HS3ST4Q9Y661 456 aa8.38□□□□□ -1.07
TOPBP1-202ENST00000503338 ZNF638Q14966 1978 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 TRAV19A0A0A6YYK7 116 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 TYW5A2RUC4 315 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 C5orf60A6NFR6 353 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 DRGXA6NNA5 263 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 F5H5T6 163 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 FAM72CH0Y354 149 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 I6L893 689 aaPredicted RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 ACSL4O60488 711 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 SEC31AO94979 1220 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 PAPLNO95428 1278 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 IFNB1P01574 187 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 SPATA31D3P0C874 917 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 SRGAP2BP0DMP2 458 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 MBL2P11226 248 aaPredicted RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 HDCP19113 662 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 MAPKAPK2P49137 400 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 CARSP49589 748 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 NDST2P52849 883 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 SLC7A9P82251 487 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 MRPS25P82663 173 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 SMAD3P84022 425 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 GBE1Q04446 702 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 AUHQ13825 339 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 CAMK1Q14012 370 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 SLMAPQ14BN4 828 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 MORF4L2Q15014 288 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 C5orf22Q49AR2 442 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 RABGAP1LQ5R372 815 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 FAM72AQ5TYM5 149 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 PIK3R6Q5UE93 754 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 FAM109BQ6ICB4 259 aaPredicted RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 FAM72DQ6L9T8 149 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 TIGD7Q6NT04 549 aaPredicted RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 NPNTQ6UXI9 565 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 PPP1R21Q6ZMI0 780 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 SPATA31D4Q6ZUB0 917 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 HDXQ7Z353 690 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 ZC3H18Q86VM9 953 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 HOOK3Q86VS8 718 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 CHSY1Q86X52 802 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 FAM72BQ86X60 149 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 TMC8Q8IU68 726 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 TDHQ8IZJ6 230 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 KIAA1958Q8N8K9 716 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 RTL3Q8N8U3 475 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 AENQ8WTP8 325 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 SLC22A17Q8WUG5 538 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 ART4Q93070 314 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 HDAC11Q96DB2 347 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 PPP1R2P1Q96PQ5 205 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 LRRC3Q9BY71 257 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 FRMD8Q9BZ67 464 aaPredicted RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 PRKD2Q9BZL6 878 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms