RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CCNB3Q8WWL7 1395 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ARHGAP31Q2M1Z3 1444 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 RGSL1A5PLK6 1076 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 FAM47E-STBD1D6RA91 191 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SMAD6O43541 496 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 AP1G1O43747 822 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 TLR2O60603 784 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SURF6O75683 361 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC22A3O75751 556 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PIAS2O75928 621 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 KLHL18O94889 574 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 OXSR1O95747 527 aaPredicted RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PRLP01236 227 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 CYP1A1P04798 512 aaPredicted RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SNRPAP09012 282 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ZBTB48P10074 688 aaPredicted RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 RARBP10826 455 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 FBLN1P23142 703 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 CRABP2P29373 138 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 IFNA8P32881 189 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ARHGAP25P42331 645 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 POU3F4P49335 361 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 TUBP50607 506 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 DRG2P55039 364 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 UBE2IP63279 158 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 MXRA7P84157 204 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 CDK18Q07002 472 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 LGALS3BPQ08380 585 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 HNRNPDQ14103 355 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 GALNT3Q14435 633 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 EFTUD2Q15029 972 aaKnown RBP eCLIP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 NONOQ15233 471 aaKnown RBP eCLIP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SEC23AQ15436 765 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ALG11Q2TAA5 492 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ODF2Q5BJF6 829 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ERICH5Q6P6B1 374 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PAQR3Q6TCH7 311 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 C15orf52Q6ZUT6 534 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 KRT74Q7RTS7 529 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 KTN1Q86UP2 1357 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PCYOX1LQ8NBM8 494 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PPFIBP2Q8ND30 876 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PIK3C3Q8NEB9 887 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC7A14Q8TBB6 771 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 CLEC4DQ8WXI8 215 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ALG3Q92685 438 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 USP13Q92995 863 aaPredicted RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SCLYQ96I15 445 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PRICKLE1Q96MT3 831 aaPredicted RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ANKRD27Q96NW4 1050 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 EYA3Q99504 573 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PLIN2Q99541 437 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC38A3Q99624 504 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 C19orf43Q9BQ61 176 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 AARSD1Q9BTE6 412 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 CINPQ9BW66 212 aaPredicted RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 CALN1Q9BXU9 219 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PACSIN1Q9BY11 444 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 MRPL1Q9BYD6 325 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 C2orf40Q9H1Z8 148 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 IPPKQ9H8X2 491 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 C1orf112Q9NSG2 853 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 OR6C2Q9NZP2 312 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 COX16Q9P0S2 106 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 GGA2Q9UJY4 613 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SNX6Q9UNH7 406 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 DNM3Q9UQ16 869 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SPEF1Q9Y4P9 236 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ASB3Q9Y575 518 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 FAM169AQ9Y6X4 670 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 MRC2Q9UBG0 1479 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 RRBP1Q9P2E9 1410 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ELP1O95163 1332 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 TYW5A2RUC4 315 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 LRRC14BA6NHZ5 514 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 NCF1BA6NI72 391 aaPredicted RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 A6NLC8 198 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 A6NNZ2 444 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 GOLGA8BA8MQT2 603 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 NCF1CA8MVU1 366 aaPredicted RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 TARM1B6A8C7 271 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 HIP1O00291 1037 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 NEMP1O14524 444 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 DOK2O60496 412 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 CIDEAO60543 219 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ATP9AO75110 1047 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 CRYZL1O95825 349 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 CLPTM1O96005 669 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 KRT6AP02538 564 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 LMNAP02545 664 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 KRT6BP04259 564 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SNRPA1P09661 255 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 UBTFL6P0CB48 400 aaPredicted RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PYGMP11217 842 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 MYCLP12524 364 aaPredicted RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 RARGP13631 454 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SELLP14151 372 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 CPA1P15085 419 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PDE6AP16499 860 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms