RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	TBL1X	O60907	577 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	CAVIN2	O95810	425 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	ASL	P04424	464 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	ERBB2	P04626	1255 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	CYP1A1	P04798	512 aa	Predicted RBP	10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	ATP5B	P06576	529 aa	Known RBP	10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	PNMA6A	P0CW24	399 aa	Predicted RBP	10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	CCR1	P32246	355 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	GBP1	P32455	592 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	COPB1	P53618	953 aa	Known RBP	10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	ZBTB16	Q05516	673 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	SLC12A1	Q13621	1099 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	PTPRN	Q16849	979 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	FUT11	Q495W5	492 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	RFWD3	Q6PCD5	774 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	CHST9	Q7L1S5	443 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	BNIPL	Q7Z465	357 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	RABEPK	Q7Z6M1	372 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	SYT12	Q8IV01	421 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	DEFB106A	Q8N104	65 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	ATP6V0D2	Q8N8Y2	350 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	ANKRD20A12P	Q8NF67	263 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	RLN3	Q8WXF3	142 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	C18orf8	Q96DM3	657 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	ZNF419	Q96HQ0	510 aa	Predicted RBP	10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	NPY6R	Q99463	290 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	LSM14B	Q9BX40	385 aa	Known RBP	10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	MKRN2	Q9H000	416 aa	Known RBP	10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	NUCKS1	Q9H1E3	243 aa	Known RBP	10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	PCED1A	Q9H1Q7	454 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	ABCB8	Q9NUT2	735 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	TMEM63C	Q9P1W3	806 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	SLC12A6	Q9UHW9	1150 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	NOCT	Q9UK39	431 aa	Known RBP	10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	PLA2G4C	Q9UP65	541 aa		10.65	□□□□□ -0.7
NEPRO-222	ENST00000494891	CEP192	Q8TEP8	1941 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	GOLGA6L7	A0A1B0GV03	622 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	PES1	O00541	588 aa	Known RBP	10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	LUC7L3	O95232	432 aa	Known RBP	10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	F9	P00740	461 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	ABCB4	P21439	1286 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	SOX5	P35711	763 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	WAS	P42768	502 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	PLK1	P53350	603 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	COPA	P53621	1224 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	OXCT1	P55809	520 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	GSC	P56915	257 aa	Predicted RBP	10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	RPS24	P62847	133 aa	Known RBP	10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	NOMO3	P69849	1222 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	PITX1	P78337	314 aa	Predicted RBP	10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	CDR2	Q01850	454 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	CREB5	Q02930	508 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	TYRO3	Q06418	890 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	SF3A2	Q15428	464 aa	Known RBP	10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	BRMS1L	Q5PSV4	323 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	MBLAC2	Q68D91	279 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	OR6B2	Q6IFH4	312 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	SLC23A3	Q6PIS1	610 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	SERPINA13P	Q6UXR4	307 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	DGLUCY	Q7Z3D6	616 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	CYP2U1	Q7Z449	544 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	NOP9	Q86U38	636 aa	Known RBP	10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	XYLT1	Q86Y38	959 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	PASD1	Q8IV76	773 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	MFN1	Q8IWA4	741 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	PGBD3	Q8N328	593 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	C12orf50	Q8NA57	414 aa	Predicted RBP	10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	MSANTD4	Q8NCY6	345 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	CADM4	Q8NFZ8	388 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	OR2T3	Q8NH03	318 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	ADAM32	Q8TC27	787 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	WFDC5	Q8TCV5	224 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	MYEOV	Q96EZ4	313 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	MYO19	Q96H55	970 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	CIPC	Q9C0C6	399 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	NAT10	Q9H0A0	1025 aa	Known RBP	10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	VPS16	Q9H269	839 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	PRDM16	Q9HAZ2	1276 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	DDIT4	Q9NX09	232 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	WSB2	Q9NYS7	404 aa	Predicted RBP	10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	KIAA1522	Q9P206	1035 aa	Predicted RBP	10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	PILRB	Q9UKJ0	227 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	PAXBP1	Q9Y5B6	917 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	RAD54B	Q9Y620	910 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	PI4KA	P42356	2102 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	GON4L	Q3T8J9	2241 aa		10.64	□□□□□ -0.71
NEPRO-222	ENST00000494891	CACNA1E	Q15878	2313 aa		10.63	□□□□□ -0.71
NEPRO-222	ENST00000494891	ITIH6	Q6UXX5	1313 aa		10.63	□□□□□ -0.71
NEPRO-222	ENST00000494891	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	10.63	□□□□□ -0.71
NEPRO-222	ENST00000494891		A0A1B0GVM2	712 aa		10.63	□□□□□ -0.71
NEPRO-222	ENST00000494891	TCAF2	A6NFQ2	919 aa		10.63	□□□□□ -0.71
NEPRO-222	ENST00000494891		F5H5T6	163 aa		10.63	□□□□□ -0.71
NEPRO-222	ENST00000494891	MAP3K13	O43283	966 aa		10.63	□□□□□ -0.71
NEPRO-222	ENST00000494891	GDF9	O60383	454 aa		10.63	□□□□□ -0.71
NEPRO-222	ENST00000494891	SYNCRIP	O60506	623 aa	Known RBP	10.63	□□□□□ -0.71
NEPRO-222	ENST00000494891	ENDOD1	O94919	500 aa		10.63	□□□□□ -0.71
NEPRO-222	ENST00000494891	EPHX1	P07099	455 aa		10.63	□□□□□ -0.71
NEPRO-222	ENST00000494891	SRPRA	P08240	638 aa	Known RBP	10.63	□□□□□ -0.71
NEPRO-222	ENST00000494891	POLR2E	P19388	210 aa	Known RBP	10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms