RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TMEM245Q9H330 911 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 POPDC2Q9HBU9 364 aa13.09□□□□□ -0.31
HSPG2-212ENST00000493940 SYNJ2BP-COX16A0A087WUM0 186 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 LNP1A1A4G5 178 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 KCNU1A8MYU2 1149 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 PES1O00541 588 aaKnown RBP13.08□□□□□ -0.32
HSPG2-212ENST00000493940 MMEP08473 750 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 CYP11B1P15538 503 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 CHRNB2P17787 502 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 EEF1GP26641 437 aaKnown RBP13.08□□□□□ -0.32
HSPG2-212ENST00000493940 GGCXP38435 758 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 CTSOP43234 321 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-212ENST00000493940 LMAN2Q12907 356 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 AASDHQ4L235 1098 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-212ENST00000493940 RAB6CQ53S08 254 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 CT47A1Q5JQC4 288 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-212ENST00000493940 PPM1JQ5JR12 505 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 RAP1GAP2Q684P5 730 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 NUGGCQ68CJ6 796 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 MBLAC2Q68D91 279 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 OR6B2Q6IFH4 312 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 SDE2Q6IQ49 451 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 CIR1Q86X95 450 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-212ENST00000493940 CACUL1Q86Y37 369 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 OR52K2Q8NGK3 314 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 SLC20A1Q8WUM9 679 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 MRGPRX3Q96LB0 322 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 FAM81BQ96LP2 452 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 SERPINB11Q96P15 392 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 RAB6CQ9H0N0 254 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 TMPRSS4Q9NRS4 437 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 VPS45Q9NRW7 570 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 COX16Q9P0S2 106 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 DACH1Q9UI36 760 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 GGA2Q9UJY4 613 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 SIK3Q9Y2K2 1263 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 SNX10Q9Y5X0 201 aa13.08□□□□□ -0.32
HSPG2-212ENST00000493940 CAPN9O14815 690 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 MAP3K13O43283 966 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 PABPC1P11940 636 aaKnown RBP13.07□□□□□ -0.32
HSPG2-212ENST00000493940 TACR2P21452 398 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 CDH5P33151 784 aaPredicted RBP13.07□□□□□ -0.32
HSPG2-212ENST00000493940 KRT9P35527 623 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 SLC11A2P49281 568 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 SLC6A3Q01959 620 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 NNTQ13423 1086 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 ST3GAL2Q16842 350 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 STPG1Q5TH74 334 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 KIAA1324Q6UXG2 1013 aaKnown RBP13.07□□□□□ -0.32
HSPG2-212ENST00000493940 LPCAT2Q7L5N7 544 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 C14orf80Q86SX3 495 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 TMPRSS6Q8IU80 811 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 APCDD1Q8J025 514 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 LGI2Q8N0V4 545 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 C12orf50Q8NA57 414 aaPredicted RBP13.07□□□□□ -0.32
HSPG2-212ENST00000493940 FIBINQ8TAL6 211 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 GOLGA1Q92805 767 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 IGSF8Q969P0 613 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 GBP4Q96PP9 640 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 PRDM16Q9HAZ2 1276 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 ITM2CQ9NQX7 267 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 USP36Q9P275 1121 aaKnown RBP13.07□□□□□ -0.32
HSPG2-212ENST00000493940 PILRBQ9UKJ0 227 aa13.07□□□□□ -0.32
HSPG2-212ENST00000493940 C4orf47A7E2U8 309 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 F8VZ95 297 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 SART1O43290 800 aaKnown RBP13.06□□□□□ -0.32
HSPG2-212ENST00000493940 EPHX1P07099 455 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 ATP1A3P13637 1013 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 ZNF18P17022 549 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 MAOBP27338 520 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 GABRB2P47870 512 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 COPB1P53618 953 aaKnown RBP13.06□□□□□ -0.32
HSPG2-212ENST00000493940 LIMK1P53667 647 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 JAM2P57087 298 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 RPL6Q02878 288 aaKnown RBP13.06□□□□□ -0.32
HSPG2-212ENST00000493940 ZNF33AQ06730 810 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 CAMK2GQ13555 558 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-212ENST00000493940 EIF4HQ15056 248 aaKnown RBP13.06□□□□□ -0.32
HSPG2-212ENST00000493940 MPP7Q5T2T1 576 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 PEAR1Q5VY43 1037 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-212ENST00000493940 SLC26A9Q7LBE3 791 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 CYP2U1Q7Z449 544 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 PHLDB2Q86SQ0 1253 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 XYLT1Q86Y38 959 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 CARNMT1Q8N4J0 409 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 EPS8L1Q8TE68 723 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 CPA5Q8WXQ8 436 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 TTC17Q96AE7 1141 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 STK33Q9BYT3 514 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 NLRC4Q9NPP4 1024 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 PRSS16Q9NQE7 514 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 FAM207AQ9NSI2 230 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-212ENST00000493940 PIGVQ9NUD9 493 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 ASNSD1Q9NWL6 643 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 DDIT4Q9NX09 232 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 WSB2Q9NYS7 404 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-212ENST00000493940 LIMA1Q9UHB6 759 aaKnown RBP13.06□□□□□ -0.32
HSPG2-212ENST00000493940 NOCTQ9UK39 431 aaKnown RBP13.06□□□□□ -0.32
HSPG2-212ENST00000493940 SLCO1B1Q9Y6L6 691 aa13.06□□□□□ -0.32
HSPG2-212ENST00000493940 CHD8Q9HCK8 2581 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms