RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 CPXM2Q8N436 756 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 ZNF513Q8N8E2 541 aaPredicted RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 TXNDC5Q8NBS9 432 aaKnown RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 CLEC4CQ8WTT0 213 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 NDRG1Q92597 394 aaKnown RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 GOLGA1Q92805 767 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 VCPIP1Q96JH7 1222 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 ZC3H10Q96K80 434 aaKnown RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 PPP1R13BQ96KQ4 1090 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 C11orf70Q9BRQ4 267 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 POLMQ9NP87 494 aaPredicted RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 TRIM10Q9UDY6 481 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 AGO1Q9UL18 857 aaKnown RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 INTUQ9ULD6 942 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 STARD13Q9Y3M8 1113 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 DUSP10Q9Y6W6 482 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 ZNF292O60281 2723 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 CFAP54Q96N23 3096 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 ANKRD62A6NC57 917 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 SGK1O00141 431 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 PIK3R2O00459 728 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 SART1O43290 800 aaKnown RBP10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 RHOBTB1O94844 696 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 LATS1O95835 1130 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 PENKP01210 267 aaPredicted RBP10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 CYBBP04839 570 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 CYP1A2P05177 515 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 H2AFZP0C0S5 128 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 CCDC175P0C221 793 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 TGM1P22735 817 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 RRM1P23921 792 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 ACADSBP45954 432 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 DGKGP49619 791 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 KRT83P78385 493 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 SPEM2Q0P670 501 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 TCEAL1Q15170 157 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 ELF2Q15723 593 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 USP39Q53GS9 565 aaKnown RBP10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 EMC10Q5UCC4 262 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 PLEKHA7Q6IQ23 1121 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 ANO7Q6IWH7 933 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 MSANTD2Q6P1R3 559 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 OLFML1Q6UWY5 402 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 TMEM92Q6UXU6 159 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 FAM183BPQ6ZVS7 135 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 H2AFVQ71UI9 128 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 KBTBD6Q86V97 674 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 DENND1CQ8IV53 801 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 FAM217AQ8IXS0 508 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 CCAR2Q8N163 923 aaKnown RBP10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 EDEM1Q92611 657 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 PDCL3Q9H2J4 239 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 PARD6AQ9NPB6 346 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 ADAM22Q9P0K1 906 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 FBXO10Q9UK96 956 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 PCDHGA5Q9Y5G8 931 aa10.97□□□□□ -0.65
SCAMP4-208ENST00000489554 KIAA1549LQ6ZVL6 1849 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 ANTXRLA6NF34 631 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 BTNL10A8MVZ5 291 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 TRIM24O15164 1050 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 ADAM23O75077 832 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 MTA2O94776 668 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 EPN2O95208 641 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 GJB6O95452 261 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 LTFP02788 710 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 CISD3P0C7P0 127 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 ABCB4P21439 1286 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 NTSR1P30989 418 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 FOXK2Q01167 660 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 PUM1Q14671 1186 aaKnown RBP eCLIP10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 E2F5Q15329 346 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 SPA17Q15506 151 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 CSRP2Q16527 193 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 PLK5Q496M5 336 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 FYB2Q5VWT5 728 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 SDE2Q6IQ49 451 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 TRNP1Q6NT89 227 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 ERMP1Q7Z2K6 904 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 PHLDB2Q86SQ0 1253 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 ERICH1Q86X53 443 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 C3orf20Q8ND61 904 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 MDGA1Q8NFP4 955 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 BHMTQ93088 406 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 ZNF653Q96CK0 615 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 RMDN1Q96DB5 314 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 TRIM62Q9BVG3 475 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 SLC2A11Q9BYW1 496 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 TPSD1Q9BZJ3 242 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 TRIM7Q9C029 511 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 ST7Q9NRC1 585 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 SEMA4GQ9NTN9 838 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 PLK2Q9NYY3 685 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 CNOT8Q9UFF9 292 aaKnown RBP10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 SFMBT1Q9UHJ3 866 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 STOML2Q9UJZ1 356 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 SLC27A6Q9Y2P4 619 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 CEP83Q9Y592 693 aa10.96□□□□□ -0.65
SCAMP4-208ENST00000489554 A0A0A6YYK5 440 aaPredicted RBP10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 TCRBV21S2A2A0A5A6 115 aa10.95□□□□□ -0.66
SCAMP4-208ENST00000489554 GFRA2O00451 464 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms