RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 BPIFB6Q8NFQ5 453 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 FOXP3Q9BZS1 431 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 CDH19Q9H159 772 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 VTA1Q9NP79 307 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 GMPR2Q9P2T1 348 aaKnown RBP16.61■□□□□ 0.25
MCF2L-229ENST00000488765 AP4E1Q9UPM8 1137 aa16.61■□□□□ 0.25
MCF2L-229ENST00000488765 CFBP00751 764 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 P4HBP07237 508 aaKnown RBP16.6■□□□□ 0.25
MCF2L-229ENST00000488765 ZNF12P17014 697 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 GRIA3P42263 894 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 ALDH3B2P48448 385 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 JAG1P78504 1218 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 KLF10Q13118 480 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 TAF5Q15542 800 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 FAM219BQ5XKK7 198 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 FAM91A1Q658Y4 838 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 TMEM270Q6UE05 265 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 DEFB132Q7Z7B7 95 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 IGFN1Q86VF2 1251 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 KATNAL2Q8IYT4 538 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 XXYLT1Q8NBI6 393 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 STN1Q9H668 368 aaKnown RBP16.6■□□□□ 0.25
MCF2L-229ENST00000488765 FARP1Q9Y4F1 1045 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-229ENST00000488765 WDR64B1ANS9 1081 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 UNGP13051 313 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-229ENST00000488765 JAK1P23458 1154 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 WASHC5Q12768 1159 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 PLCL1Q15111 1095 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 ADRM1Q16186 407 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 SCARA3Q6AZY7 606 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 DCLRE1AQ6PJP8 1040 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 CHERPQ8IWX8 916 aaKnown RBP16.6■□□□□ 0.25
MCF2L-229ENST00000488765 PDZD8Q8NEN9 1154 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 PDCD6IPQ8WUM4 868 aaKnown RBP16.6■□□□□ 0.25
MCF2L-229ENST00000488765 CALN1Q9BXU9 219 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 NRDE2Q9H7Z3 1164 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 COG4Q9H9E3 785 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 KLQ9UEF7 1012 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 ZC3H7BQ9UGR2 993 aaKnown RBP16.6■□□□□ 0.25
MCF2L-229ENST00000488765 BCAP29Q9UHQ4 241 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 ZNRF3Q9ULT6 936 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 MAGED2Q9UNF1 606 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-229ENST00000488765 FAM47E-STBD1D6RA91 191 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 CHEK2O96017 543 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 EPHX2P34913 555 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 CEP55Q53EZ4 464 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 REM2Q8IYK8 340 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-229ENST00000488765 LENG9Q96B70 501 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 FAF2Q96CS3 445 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 FEM1CQ96JP0 617 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 RNF38Q9H0F5 515 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 NOL6Q9H6R4 1146 aaKnown RBP16.6■□□□□ 0.25
MCF2L-229ENST00000488765 PCDH9Q9HC56 1237 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 RAB6BQ9NRW1 208 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.6■□□□□ 0.25
MCF2L-229ENST00000488765 STK39Q9UEW8 545 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 ITGA11Q9UKX5 1188 aa16.6■□□□□ 0.25
MCF2L-229ENST00000488765 SNED1Q8TER0 1413 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 MEIS2O14770 477 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 ONECUT3O60422 494 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-229ENST00000488765 TIPRLO75663 272 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 KRT75O95678 551 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 APRTP07741 180 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 GAP43P17677 238 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 SOX10P56693 466 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 OGDHQ02218 1023 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 KIAA2013Q8IYS2 634 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 ADCY4Q8NFM4 1077 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 CYGBQ8WWM9 190 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 OSBPL11Q9BXB4 747 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 CLK4Q9HAZ1 481 aaKnown RBP16.59■□□□□ 0.25
MCF2L-229ENST00000488765 FIS1Q9Y3D6 152 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 PPME1Q9Y570 386 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 NR2E3Q9Y5X4 410 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 DOCK2Q92608 1830 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 GAKO14976 1311 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 ANKRD34BA5PLL1 514 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 ENO2P09104 434 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-229ENST00000488765 ARSAP15289 507 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 EEF1B2P24534 225 aaKnown RBP16.59■□□□□ 0.25
MCF2L-229ENST00000488765 PRDX6P30041 224 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 LRP8Q14114 963 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 IKBKEQ14164 716 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 PITRM1Q5JRX3 1037 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 ANKRD26P1Q6NSI1 321 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 USP43Q70EL4 1123 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 USP37Q86T82 979 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 DEPDC4Q8N2C3 294 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 HIPK3Q9H422 1215 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 PRELID1Q9Y255 219 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 ITM2BQ9Y287 266 aa16.59■□□□□ 0.25
MCF2L-229ENST00000488765 ARHGEF35A5YM69 484 aa16.58■□□□□ 0.25
MCF2L-229ENST00000488765 NCAM1P13591 858 aa16.58■□□□□ 0.25
MCF2L-229ENST00000488765 TCEAL1Q15170 157 aa16.58■□□□□ 0.25
MCF2L-229ENST00000488765 CCDC142Q17RM4 750 aa16.58■□□□□ 0.25
MCF2L-229ENST00000488765 BNC2Q6ZN30 1099 aaPredicted RBP16.58■□□□□ 0.25
MCF2L-229ENST00000488765 SH3BP5LQ7L8J4 393 aa16.58■□□□□ 0.25
MCF2L-229ENST00000488765 ZNF781Q8N8C0 355 aa16.58■□□□□ 0.25
MCF2L-229ENST00000488765 VCPIP1Q96JH7 1222 aa16.58■□□□□ 0.25
MCF2L-229ENST00000488765 RPL10LQ96L21 214 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms