RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ZNF697Q5TEC3 545 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 MANEALQ5VSG8 457 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 RWDD4Q6NW29 188 aaKnown RBP14.89□□□□□ -0.03
COL9A1-207ENST00000486080 UNC45BQ8IWX7 931 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 ATP6V0D2Q8N8Y2 350 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 SEC14L1Q92503 715 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 RUBCNQ92622 972 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 WBP2Q969T9 261 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 BTN2A3PQ96KV6 586 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 RAB17Q9H0T7 212 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 TMEM51Q9NW97 253 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 HCFC2Q9Y5Z7 792 aa14.89□□□□□ -0.03
COL9A1-207ENST00000486080 GOLGA6L7A0A1B0GV03 622 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 E9PAM4 449 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 H7C0C1 242 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 GAS8O95995 478 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 TUBBP07437 444 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 ZSCAN5DPP0CG00 497 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 MCM3P25205 808 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 TNFRSF8P28908 595 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 BMP8BP34820 402 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 CCR2P41597 374 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 RPL21P46778 160 aaKnown RBP14.88□□□□□ -0.03
COL9A1-207ENST00000486080 ATP5OP48047 213 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 VPS41P49754 854 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 NRLP54845 237 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 PTK6Q13882 451 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 PAFAH1B3Q15102 231 aaKnown RBP14.88□□□□□ -0.03
COL9A1-207ENST00000486080 DARS2Q6PI48 645 aaKnown RBP14.88□□□□□ -0.03
COL9A1-207ENST00000486080 TDHQ8IZJ6 230 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 NPWQ8N729 165 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 ARL14EPQ8N8R7 260 aaPredicted RBP14.88□□□□□ -0.03
COL9A1-207ENST00000486080 C1orf74Q96LT6 269 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 KLF16Q9BXK1 252 aaPredicted RBP14.88□□□□□ -0.03
COL9A1-207ENST00000486080 ASAH2Q9NR71 780 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 SMPD4Q9NXE4 827 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 SLC12A6Q9UHW9 1150 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 NFU1Q9UMS0 254 aa14.88□□□□□ -0.03
COL9A1-207ENST00000486080 A0A1W2PRU2 124 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 CCDC151A5D8V7 595 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 SGK1O00141 431 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 SEC31AO94979 1220 aaKnown RBP14.87□□□□□ -0.03
COL9A1-207ENST00000486080 KRT14P02533 472 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 IRF1P10914 325 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 MBL2P11226 248 aaPredicted RBP14.87□□□□□ -0.03
COL9A1-207ENST00000486080 NRIP1P48552 1158 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 NR2C2P49116 596 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 IRAK1P51617 712 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 ZNF135P52742 658 aaPredicted RBP14.87□□□□□ -0.03
COL9A1-207ENST00000486080 LMNB2Q03252 620 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 AUHQ13825 339 aaKnown RBP14.87□□□□□ -0.03
COL9A1-207ENST00000486080 STXBP5Q5T5C0 1151 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 RAP1GAP2Q684P5 730 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 NADSYN1Q6IA69 706 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 TMCO3Q6UWJ1 677 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 SYDE1Q6ZW31 735 aaPredicted RBP14.87□□□□□ -0.03
COL9A1-207ENST00000486080 ZNF683Q8IZ20 524 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 FAM71DQ8N9W8 422 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 TBC1D31Q96DN5 1066 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 TCEAL4Q96EI5 215 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 ZFRQ96KR1 1074 aaKnown RBP14.87□□□□□ -0.03
COL9A1-207ENST00000486080 OLFM3Q96PB7 478 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 NEUROG2Q9H2A3 272 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 ATXN3LQ9H3M9 355 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 TLE6Q9H808 572 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 PRDM16Q9HAZ2 1276 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 MPP6Q9NZW5 540 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 ASIC3Q9UHC3 531 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 VANGL2Q9ULK5 521 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 STC2O76061 302 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 C1RP00736 705 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 IFNB1P01574 187 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 KLKB1P03952 638 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 HDCP19113 662 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 IVDP26440 423 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 ECHS1P30084 290 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 HOXC13P31276 330 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 COG7P83436 770 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 NRG1Q02297 640 aaPredicted RBP14.87□□□□□ -0.03
COL9A1-207ENST00000486080 NUGGCQ68CJ6 796 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 RTL10Q7L3V2 364 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 MAB21L3Q8N8X9 362 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 RSAD2Q8WXG1 361 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 MRPS31Q92665 395 aaKnown RBP14.87□□□□□ -0.03
COL9A1-207ENST00000486080 MYEOVQ96EZ4 313 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 PRMT1Q99873 361 aaKnown RBP14.87□□□□□ -0.03
COL9A1-207ENST00000486080 USP29Q9HBJ7 922 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 ARGLU1Q9NWB6 273 aaPredicted RBP14.87□□□□□ -0.03
COL9A1-207ENST00000486080 GRHL1Q9NZI5 618 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 DNMT3BQ9UBC3 853 aaKnown RBP14.87□□□□□ -0.03
COL9A1-207ENST00000486080 SHROOM3Q8TF72 1996 aa14.87□□□□□ -0.03
COL9A1-207ENST00000486080 OLFM2O95897 454 aa14.86□□□□□ -0.03
COL9A1-207ENST00000486080 PTPN2P17706 415 aa14.86□□□□□ -0.03
COL9A1-207ENST00000486080 RBL1P28749 1068 aa14.86□□□□□ -0.03
COL9A1-207ENST00000486080 ZXDBP98169 803 aa14.86□□□□□ -0.03
COL9A1-207ENST00000486080 CUL1Q13616 776 aa14.86□□□□□ -0.03
COL9A1-207ENST00000486080 HLTFQ14527 1009 aaKnown RBP eCLIP14.86□□□□□ -0.03
COL9A1-207ENST00000486080 FBXL22Q6P050 247 aa14.86□□□□□ -0.03
COL9A1-207ENST00000486080 DENND1CQ8IV53 801 aa14.86□□□□□ -0.03
COL9A1-207ENST00000486080 SHKBP1Q8TBC3 707 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms