RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 ARHGEF38Q9NXL2 777 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 RRN3Q9NYV6 651 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 SALL4Q9UJQ4 1053 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 STOML2Q9UJZ1 356 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 PCDHA13Q9Y5I0 950 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 GOLGA6L6A8MZA4 724 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 IL1R2P27930 398 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 SSR1P43307 286 aaKnown RBP12.29□□□□□ -0.44
APTX-227ENST00000485479 STARD6P59095 220 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 NR1H3Q13133 447 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 CA9Q16790 459 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 ALFQ53S48 1182 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 FSCBQ5H9T9 825 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 STRADAQ7RTN6 431 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 TFAP2DQ7Z6R9 452 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 RALGPS2Q86X27 583 aaPredicted RBP12.29□□□□□ -0.44
APTX-227ENST00000485479 CARNMT1Q8N4J0 409 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 TMEM105Q8N8V8 129 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 PJA1Q8NG27 643 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 CD101Q93033 1021 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 RPRD1AQ96P16 312 aaPredicted RBP12.29□□□□□ -0.44
APTX-227ENST00000485479 LACRTQ9GZZ8 138 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 ZWILCHQ9H900 591 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 ARHGEF4Q9NR80 690 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 ZNF510Q9Y2H8 683 aa12.29□□□□□ -0.44
APTX-227ENST00000485479 F5H5T6 163 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 GFRA2O00451 464 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 HOXC11O43248 304 aaPredicted RBP12.28□□□□□ -0.44
APTX-227ENST00000485479 BUB1O43683 1085 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 ENDOD1O94919 500 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 PENKP01210 267 aaPredicted RBP12.28□□□□□ -0.44
APTX-227ENST00000485479 MIPP30301 263 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 PRKCQQ04759 706 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 FZD5Q13467 585 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 MESDQ14696 234 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 SPA17Q15506 151 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 CYP4V2Q6ZWL3 525 aaPredicted RBP12.28□□□□□ -0.44
APTX-227ENST00000485479 LRRC8AQ8IWT6 810 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 CCDC105Q8IYK2 499 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 CCDC170Q8IYT3 715 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 CPXM2Q8N436 756 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 OR52K2Q8NGK3 314 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 SORCS1Q8WY21 1168 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 C8orf33Q9H7E9 229 aaPredicted RBP12.28□□□□□ -0.44
APTX-227ENST00000485479 SLC12A6Q9UHW9 1150 aa12.28□□□□□ -0.44
APTX-227ENST00000485479 EIF3CLB5ME19 914 aaKnown RBP12.27□□□□□ -0.44
APTX-227ENST00000485479 PRRT4C9JH25 899 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 E9PAM4 449 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 CREB3O43889 395 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 CACNG3O60359 315 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 KAT7O95251 611 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 LCA5LO95447 670 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 F9P00740 461 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 CYBBP04839 570 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 SLC2A3P11169 496 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 TNNT1P13805 278 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 HLA-FP30511 346 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 CD70P32970 193 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 ADRA1BP35368 520 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 DGKGP49619 791 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 GSDMDP57764 484 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 GEN1Q17RS7 908 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 C2orf27AQ580R0 203 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 TMEM196Q5HYL7 178 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 BRMS1LQ5PSV4 323 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 ARTNQ5T4W7 220 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 MFN1Q8IWA4 741 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 ZNF687Q8N1G0 1237 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 PHTF2Q8N3S3 785 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 NETO2Q8NC67 525 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 EIF3CQ99613 913 aaKnown RBP12.27□□□□□ -0.44
APTX-227ENST00000485479 SNRNP25Q9BV90 132 aaKnown RBP12.27□□□□□ -0.44
APTX-227ENST00000485479 ABCB8Q9NUT2 735 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 SIT1Q9Y3P8 196 aa12.27□□□□□ -0.44
APTX-227ENST00000485479 MYO1FO00160 1098 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 RNF40O75150 1001 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 CHRNB1P11230 501 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 NOP2P46087 812 aaKnown RBP12.27□□□□□ -0.45
APTX-227ENST00000485479 CCZ1BP86790 482 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 CCZ1P86791 482 aaPredicted RBP12.27□□□□□ -0.45
APTX-227ENST00000485479 CCINQ13939 588 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 GAS6Q14393 721 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 ATP13A4Q4VNC1 1196 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 MPPE1Q53F39 396 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 C10orf76Q5T2E6 689 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 RWDD4Q6NW29 188 aaKnown RBP12.27□□□□□ -0.45
APTX-227ENST00000485479 SLFN11Q7Z7L1 901 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 HSPH1Q92598 858 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 SHDQ96IW2 340 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 LMAN1LQ9HAT1 526 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 NDFIP2Q9NV92 336 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 MARK1Q9P0L2 795 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 DEC1Q9P2X7 70 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 OR12D3Q9UGF7 316 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 USP18Q9UMW8 372 aa12.27□□□□□ -0.45
APTX-227ENST00000485479 MYO18AQ92614 2054 aaKnown RBP12.27□□□□□ -0.45
APTX-227ENST00000485479 TBC1D3BA6NDS4 549 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 H0Y626 953 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 K7EQS6 105 aa12.26□□□□□ -0.45
APTX-227ENST00000485479 LATS1O95835 1130 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms