RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 P2RY11Q96G91 374 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 SPATA13Q96N96 652 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 ADAM12O43184 909 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 METTL18O95568 372 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 SRGAP2BP0DMP2 458 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 RPL17P18621 184 aaKnown RBP17.22■□□□□ 0.35
CTSA-207ENST00000484855 MAGEA6P43360 314 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 MTM1Q13496 603 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 ANKRD20A2Q5SQ80 823 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 ANKRD20A1Q5TYW2 823 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 ANKRD20A3Q5VUR7 823 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 NECAB2Q7Z6G3 386 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 ATP11CQ8NB49 1132 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 ZNF689Q96CS4 500 aaPredicted RBP17.22■□□□□ 0.35
CTSA-207ENST00000484855 FRMD8Q9BZ67 464 aaPredicted RBP17.22■□□□□ 0.35
CTSA-207ENST00000484855 TLR8Q9NR97 1041 aaKnown RBP17.22■□□□□ 0.35
CTSA-207ENST00000484855 TMEM51Q9NW97 253 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 COMMD8Q9NX08 183 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 SEPT10Q9P0V9 454 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 BACE2Q9Y5Z0 518 aa17.22■□□□□ 0.35
CTSA-207ENST00000484855 MKI67P46013 3256 aaKnown RBP17.22■□□□□ 0.35
CTSA-207ENST00000484855 RNF103O00237 685 aa17.21■□□□□ 0.35
CTSA-207ENST00000484855 C2CD2LO14523 706 aa17.21■□□□□ 0.35
CTSA-207ENST00000484855 NCAM2O15394 837 aa17.21■□□□□ 0.35
CTSA-207ENST00000484855 SHOX2O60902 331 aaPredicted RBP17.21■□□□□ 0.35
CTSA-207ENST00000484855 ZNF189O75820 626 aaPredicted RBP17.21■□□□□ 0.35
CTSA-207ENST00000484855 MOCS2O96007 188 aaPredicted RBP17.21■□□□□ 0.35
CTSA-207ENST00000484855 RAG1P15918 1043 aa17.21■□□□□ 0.35
CTSA-207ENST00000484855 OR1D2P34982 312 aa17.21■□□□□ 0.35
CTSA-207ENST00000484855 PSEN1P49768 467 aa17.21■□□□□ 0.35
CTSA-207ENST00000484855 TAF10Q12962 218 aa17.21■□□□□ 0.35
CTSA-207ENST00000484855 RWDD4Q6NW29 188 aaKnown RBP17.21■□□□□ 0.35
CTSA-207ENST00000484855 FBXO36Q8NEA4 188 aa17.21■□□□□ 0.35
CTSA-207ENST00000484855 ZNF558Q96NG5 402 aa17.21■□□□□ 0.35
CTSA-207ENST00000484855 WDR83Q9BRX9 315 aaKnown RBP17.21■□□□□ 0.35
CTSA-207ENST00000484855 TLR6Q9Y2C9 796 aa17.21■□□□□ 0.35
CTSA-207ENST00000484855 EXOC1LA0A1B0GW35 172 aa17.21■□□□□ 0.34
CTSA-207ENST00000484855 KIAA0355O15063 1070 aa17.21■□□□□ 0.34
CTSA-207ENST00000484855 EFCAB14O75071 495 aa17.21■□□□□ 0.34
CTSA-207ENST00000484855 SOD2P04179 222 aa17.21■□□□□ 0.34
CTSA-207ENST00000484855 MX2P20592 715 aa17.21■□□□□ 0.34
CTSA-207ENST00000484855 WDR5P61964 334 aaKnown RBP17.21■□□□□ 0.34
CTSA-207ENST00000484855 IFI35P80217 286 aaPredicted RBP17.21■□□□□ 0.34
CTSA-207ENST00000484855 ZNF771Q7L3S4 317 aaPredicted RBP17.21■□□□□ 0.34
CTSA-207ENST00000484855 GIPC2Q8TF65 315 aa17.21■□□□□ 0.34
CTSA-207ENST00000484855 TMEM169Q96HH4 297 aa17.21■□□□□ 0.34
CTSA-207ENST00000484855 RC3H2Q9HBD1 1191 aaKnown RBP17.21■□□□□ 0.34
CTSA-207ENST00000484855 CLIC5Q9NZA1 410 aa17.21■□□□□ 0.34
CTSA-207ENST00000484855 ZMYND8Q9ULU4 1186 aaPredicted RBP17.21■□□□□ 0.34
CTSA-207ENST00000484855 NEU3Q9UQ49 428 aa17.21■□□□□ 0.34
CTSA-207ENST00000484855 CLUHO75153 1309 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 E7EVH7 732 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 OPHN1O60890 802 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 ATF6P18850 670 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 TPSB2P20231 275 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 HTR7P34969 479 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 PHBP35232 272 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 FDFT1P37268 417 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 TBX4P57082 545 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 GNGT1P63211 74 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 EFEMP1Q12805 493 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 SEMA5AQ13591 1074 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 BTG3Q14201 252 aaPredicted RBP17.2■□□□□ 0.34
CTSA-207ENST00000484855 TPSAB1Q15661 275 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 TNFAIP8L3Q5GJ75 292 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 TTC19Q6DKK2 380 aaPredicted RBP17.2■□□□□ 0.34
CTSA-207ENST00000484855 TMEM199Q8N511 208 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 TBC1D31Q96DN5 1066 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 FCRL2Q96LA5 508 aaPredicted RBP17.2■□□□□ 0.34
CTSA-207ENST00000484855 OLA1Q9NTK5 396 aaKnown RBP17.2■□□□□ 0.34
CTSA-207ENST00000484855 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.2■□□□□ 0.34
CTSA-207ENST00000484855 CTNNAL1Q9UBT7 734 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 CHMP2BQ9UQN3 213 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 DOCK4Q8N1I0 1966 aa17.2■□□□□ 0.34
CTSA-207ENST00000484855 SLC38A8A6NNN8 435 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 A6NNZ2 444 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 KCNU1A8MYU2 1149 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 CDH16O75309 829 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 SLC2A3P11169 496 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 ATP5DP30049 168 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 HOXC13P31276 330 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 GPX6P59796 221 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 PPIDQ08752 370 aaKnown RBP17.19■□□□□ 0.34
CTSA-207ENST00000484855 GALNT2Q10471 571 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 TUBB8Q3ZCM7 444 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 CCDC38Q502W7 563 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 SLC39A11Q8N1S5 342 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 COLGALT1Q8NBJ5 622 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 MCUQ8NE86 351 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 HDAC11Q96DB2 347 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 CEP41Q9BYV8 373 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 BRD8Q9H0E9 1235 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 FGF10O15520 208 aaPredicted RBP17.19■□□□□ 0.34
CTSA-207ENST00000484855 ACRP10323 421 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 LAG3P18627 525 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 ELK3P41970 407 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 WASHC5Q12768 1159 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 RASIP1Q5U651 963 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 MANEALQ5VSG8 457 aa17.19■□□□□ 0.34
CTSA-207ENST00000484855 PALM2Q8IXS6 379 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms