RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 IGLV3-27P01718 113 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 FGBP02675 491 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 EPHB2P29323 1055 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 RGS19P49795 217 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 GYS2P54840 703 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 ARL4CP56559 192 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 TBX4P57082 545 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 PPIDQ08752 370 aaKnown RBP14.47□□□□□ -0.09
CLK3-204ENST00000483723 IFFO1Q0D2I5 559 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 GALNT2Q10471 571 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 OTOP2Q7RTS6 562 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 TP53INP2Q8IXH6 220 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 NPWQ8N729 165 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 CCDC110Q8TBZ0 833 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 GIPC2Q8TF65 315 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 PGM2Q96G03 612 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 MYRFLQ96LU7 910 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 SPATA13Q96N96 652 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 TTC25Q96NG3 672 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 LGMNQ99538 433 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 ETNK1Q9HBU6 452 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 RAB6BQ9NRW1 208 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 FNIP2Q9P278 1114 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 STK39Q9UEW8 545 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 MAFFQ9ULX9 164 aa14.47□□□□□ -0.09
CLK3-204ENST00000483723 GOLGA6L10A6NI86 522 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 WASH4PA8MWX3 477 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 GJB5O95377 273 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 HMGA1P17096 107 aaKnown RBP14.46□□□□□ -0.09
CLK3-204ENST00000483723 EN2P19622 333 aaPredicted RBP14.46□□□□□ -0.09
CLK3-204ENST00000483723 SERPINB6P35237 376 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 PPM1AP35813 382 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 BASP1P80723 227 aaKnown RBP14.46□□□□□ -0.09
CLK3-204ENST00000483723 GAD2Q05329 585 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 RING1Q06587 406 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 WASHC5Q12768 1159 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 HIF1AQ16665 826 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 KRT71Q3SY84 523 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 TNFAIP8L3Q5GJ75 292 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 ANKRD20A2Q5SQ80 823 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 FNBP1LQ5T0N5 605 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 C6orf118Q5T5N4 469 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 ANKRD20A1Q5TYW2 823 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 ANKRD20A3Q5VUR7 823 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 ZNF683Q8IZ20 524 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 MCUQ8NE86 351 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 DPF3Q92784 378 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 EXOC4Q96A65 974 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 HDAC11Q96DB2 347 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 P2RY11Q96G91 374 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 C9orf72Q96LT7 481 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 YME1L1Q96TA2 773 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 RXFP1Q9HBX9 757 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 XPO7Q9UIA9 1087 aaKnown RBP14.46□□□□□ -0.09
CLK3-204ENST00000483723 HS3ST4Q9Y661 456 aa14.46□□□□□ -0.09
CLK3-204ENST00000483723 C2CD2LO14523 706 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 FGF10O15520 208 aaPredicted RBP14.46□□□□□ -0.1
CLK3-204ENST00000483723 METTL18O95568 372 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 ACSL3O95573 720 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 TBX18O95935 607 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 CSH1P0DML2 217 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 CSH2P0DML3 217 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 TSHRP16473 764 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 TPSB2P20231 275 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 MX2P20592 715 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 ZNF33AQ06730 810 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 EFEMP1Q12805 493 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 PDIA2Q13087 525 aaKnown RBP14.46□□□□□ -0.1
CLK3-204ENST00000483723 SEMA5AQ13591 1074 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 TERF2Q15554 542 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 TPSAB1Q15661 275 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 MSS51Q4VC12 460 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 PPP1R21Q6ZMI0 780 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 CCDC33Q8N5R6 958 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 LZTR1Q8N653 840 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 PDZD8Q8NEN9 1154 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 FAM76AQ8TAV0 307 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 TLCD1Q96CP7 247 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 TBC1D31Q96DN5 1066 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 SIK2Q9H0K1 926 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.46□□□□□ -0.1
CLK3-204ENST00000483723 PSD3Q9NYI0 1048 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 MARCH2Q9P0N8 246 aa14.46□□□□□ -0.1
CLK3-204ENST00000483723 OPHN1O60890 802 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 URODP06132 367 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 FDFT1P37268 417 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 KPNA1P52294 538 aaPredicted RBP14.45□□□□□ -0.1
CLK3-204ENST00000483723 STAT4Q14765 748 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 FASTKD3Q14CZ7 662 aaKnown RBP14.45□□□□□ -0.1
CLK3-204ENST00000483723 TMEM240Q5SV17 173 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 ACBD5Q5T8D3 534 aaPredicted RBP14.45□□□□□ -0.1
CLK3-204ENST00000483723 PIK3R6Q5UE93 754 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 KCTD16Q68DU8 428 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 KLHDC10Q6PID8 442 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 C14orf80Q86SX3 495 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 VPS52Q8N1B4 723 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 ATP6V0D2Q8N8Y2 350 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 NETO2Q8NC67 525 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 NUP205Q92621 2012 aa14.45□□□□□ -0.1
CLK3-204ENST00000483723 BADQ92934 168 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms