RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 DDI1Q8WTU0 396 aa20.6■□□□□ 0.89
TRAPPC12-220ENST00000482645 ZNF592Q92610 1267 aa20.6■□□□□ 0.89
TRAPPC12-220ENST00000482645 MAGEB5Q9BZ81 275 aa20.6■□□□□ 0.89
TRAPPC12-220ENST00000482645 SLC2A4RGQ9NR83 387 aa20.6■□□□□ 0.89
TRAPPC12-220ENST00000482645 VANGL2Q9ULK5 521 aa20.6■□□□□ 0.89
TRAPPC12-220ENST00000482645 CA14Q9ULX7 337 aa20.6■□□□□ 0.89
TRAPPC12-220ENST00000482645 NCOR1O75376 2440 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 KIF2AO00139 706 aaPredicted RBP20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 SRGAP2O75044 1071 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 CYBBP04839 570 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 SLC1A1P43005 524 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 SGSHP51688 502 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 NR1H3Q13133 447 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 MTA1Q13330 715 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 AUHQ13825 339 aaKnown RBP20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 KCNT1Q5JUK3 1230 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 IER5LQ5T953 404 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 NT5DC3Q86UY8 548 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 FAM217AQ8IXS0 508 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 CPXM2Q8N436 756 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 HSPH1Q92598 858 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 DNASE1L2Q92874 299 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 NTAN1Q96AB6 310 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 MYEOVQ96EZ4 313 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 PRICKLE1Q96MT3 831 aaPredicted RBP20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 HAPLN3Q96S86 360 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 NCAPGQ9BPX3 1015 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 SNRNP25Q9BV90 132 aaKnown RBP20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 AMFRQ9UKV5 643 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 FZD10Q9ULW2 581 aa20.59■□□□□ 0.89
TRAPPC12-220ENST00000482645 FANCGO15287 622 aa20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 IL1R2P27930 398 aa20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 HADHQ16836 314 aaKnown RBP20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 C14orf80Q86SX3 495 aa20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 UBALD2Q8IYN6 164 aa20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 CFAP52Q8N1V2 620 aa20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 PYROXD2Q8N2H3 581 aa20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 NAT16Q8N8M0 369 aa20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 TMA16Q96EY4 203 aaKnown RBP20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 RPRD1AQ96P16 312 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 NAPGQ99747 312 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 DHX35Q9H5Z1 703 aaKnown RBP20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 STIM2Q9P246 746 aa20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 OR12D3Q9UGF7 316 aa20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 AP4E1Q9UPM8 1137 aa20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 PIAS3Q9Y6X2 628 aa20.58■□□□□ 0.89
TRAPPC12-220ENST00000482645 TYW5A2RUC4 315 aaKnown RBP20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 TBL1XO60907 577 aa20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 SLC34A2O95436 690 aa20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 ATP1A1P05023 1023 aaKnown RBP20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 TYRP14679 529 aa20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 CASQ1P31415 396 aa20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 MLLT6P55198 1093 aaPredicted RBP20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 RPS24P62847 133 aaKnown RBP20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 GAD2Q05329 585 aa20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 MPPE1Q53F39 396 aa20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 ZFYVE27Q5T4F4 411 aa20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 ERMARDQ5T6L9 678 aa20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 MEI1Q5TIA1 1274 aa20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 TXNRD3NBQ6F5E7 133 aa20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 FBXL22Q6P050 247 aa20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 CIR1Q86X95 450 aaPredicted RBP20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 P2RY11Q96G91 374 aa20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 PRMT1Q99873 361 aaKnown RBP20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 JRKLQ9Y4A0 524 aa20.58■□□□□ 0.88
TRAPPC12-220ENST00000482645 CTAGE9A4FU28 777 aa20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 CREB3O43889 395 aa20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 GJA4P35212 333 aa20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 AIF1P55008 147 aa20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 TAS2R40P59535 323 aa20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 SLC25A11Q02978 314 aaKnown RBP20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 SCAPQ12770 1279 aa20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 CA9Q16790 459 aa20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 SLC44A4Q53GD3 710 aa20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 RABGAP1LQ5R372 815 aa20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 LRRC31Q6UY01 552 aa20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 CYP4V2Q6ZWL3 525 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 TRPV5Q9NQA5 729 aa20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 KLHL11Q9NVR0 708 aa20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 TTC28Q96AY4 2481 aa20.57■□□□□ 0.88
TRAPPC12-220ENST00000482645 COL4A3Q01955 1670 aa20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 E9PAM4 449 aa20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 FAM72CH0Y354 149 aa20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 MARCKSL1P49006 195 aa20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 PPP6R3Q5H9R7 873 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 FAM72AQ5TYM5 149 aa20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 FYB2Q5VWT5 728 aa20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 NAIF1Q69YI7 327 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 FAM72DQ6L9T8 149 aa20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 RWDD4Q6NW29 188 aaKnown RBP20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 TPRG1Q6ZUI0 275 aa20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 FAM72BQ86X60 149 aa20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 HJURPQ8NCD3 748 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 IGSF8Q969P0 613 aa20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 C1orf74Q96LT6 269 aa20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.56■□□□□ 0.88
TRAPPC12-220ENST00000482645 COL4A2P08572 1712 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 SPECC1L-ADORA2AF8WAN1 911 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 HOXC11O43248 304 aaPredicted RBP20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 DCXO43602 365 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms