RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 SORCS1Q8WY21 1168 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 LMLNQ96KR4 655 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 XPO6Q96QU8 1125 aaKnown RBP12.68□□□□□ -0.38
PTPRF-213ENST00000481019 IER2Q9BTL4 223 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 TRIM62Q9BVG3 475 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 ADAM22Q9P0K1 906 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 STIM2Q9P246 746 aa12.68□□□□□ -0.38
PTPRF-213ENST00000481019 MYO18AQ92614 2054 aaKnown RBP12.68□□□□□ -0.38
PTPRF-213ENST00000481019 GPR179Q6PRD1 2367 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 EML5Q05BV3 1969 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 GOLGA6L9A6NEM1 432 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 ATMINO43313 823 aaPredicted RBP12.67□□□□□ -0.38
PTPRF-213ENST00000481019 SERPING1P05155 500 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 TACR2P21452 398 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 TNFAIP3P21580 790 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 FECHP22830 423 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 CD70P32970 193 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 NBL1P41271 181 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 NSFP46459 744 aaKnown RBP12.67□□□□□ -0.38
PTPRF-213ENST00000481019 CXCR3P49682 368 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 SNX16P57768 344 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 KRT83P78385 493 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 DMC1Q14565 340 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 C15orf59Q2T9L4 293 aaPredicted RBP12.67□□□□□ -0.38
PTPRF-213ENST00000481019 ZNF528Q3MIS6 628 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 SLC25A52Q3SY17 297 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 CCDC14Q49A88 953 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 MPPE1Q53F39 396 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 FSCBQ5H9T9 825 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 MS4A13Q5J8X5 152 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 ACAD10Q6JQN1 1059 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 MCOLN2Q8IZK6 566 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 LGI2Q8N0V4 545 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 RXFP2Q8WXD0 754 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 TMA16Q96EY4 203 aaKnown RBP12.67□□□□□ -0.38
PTPRF-213ENST00000481019 CCDC42Q96M95 316 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 MAGEB5Q9BZ81 275 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 SLC27A6Q9Y2P4 619 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 HS3ST4Q9Y661 456 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTPRF-213ENST00000481019 ZNF292O60281 2723 aa12.67□□□□□ -0.38
PTPRF-213ENST00000481019 SSU72P8A0A1W2PR75 194 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 C2CD4BA6NLJ0 364 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 WASH3PC4AMC7 463 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 LILRB5O75023 590 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 APOEP02649 317 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 CYBBP04839 570 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 RRM1P23921 792 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 HLA-FP30511 346 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 RFC1P35251 1148 aaPredicted RBP12.66□□□□□ -0.38
PTPRF-213ENST00000481019 NUMBP49757 651 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 GSCP56915 257 aaPredicted RBP12.66□□□□□ -0.38
PTPRF-213ENST00000481019 MRPS21P82921 87 aaKnown RBP12.66□□□□□ -0.38
PTPRF-213ENST00000481019 ATP11AP98196 1134 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 OGDHQ02218 1023 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 KLHL30Q0D2K2 578 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 PPP1R15BQ5SWA1 713 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 SYT13Q7L8C5 426 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 ASCL5Q7RTU5 278 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 CHSY1Q86X52 802 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 ZBTB44Q8NCP5 570 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 RNF34Q969K3 372 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 IGSF8Q969P0 613 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 EXOC4Q96A65 974 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 FAM122AQ96E09 287 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 PGAP3Q96FM1 320 aaPredicted RBP12.66□□□□□ -0.38
PTPRF-213ENST00000481019 BTN2A3PQ96KV6 586 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 CD248Q9HCU0 757 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 ABCB8Q9NUT2 735 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.66□□□□□ -0.38
PTPRF-213ENST00000481019 ARHGEF38Q9NXL2 777 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 MMP17Q9ULZ9 603 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 STARD13Q9Y3M8 1113 aa12.66□□□□□ -0.38
PTPRF-213ENST00000481019 MUC22E2RYF6 1773 aaPredicted RBP12.66□□□□□ -0.38
PTPRF-213ENST00000481019 PIEZO1Q92508 2521 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 ESPNB1AK53 854 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 HRO43593 1189 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 PAGE1O75459 146 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 ENDOD1O94919 500 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 TUBB4AP04350 444 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 CCR1P32246 355 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 GBP1P32455 592 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 RPL7AP62424 266 aaKnown RBP12.65□□□□□ -0.38
PTPRF-213ENST00000481019 DEUP1Q05D60 604 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 C1QBPQ07021 282 aaKnown RBP12.65□□□□□ -0.38
PTPRF-213ENST00000481019 AUHQ13825 339 aaKnown RBP12.65□□□□□ -0.38
PTPRF-213ENST00000481019 PPP2R5DQ14738 602 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 SPA17Q15506 151 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 KIAA1211LQ6NV74 962 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 FBXL22Q6P050 247 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 WDR59Q6PJI9 974 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 ARCQ7LC44 396 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 KIAA0907Q7Z7F0 614 aaPredicted RBP12.65□□□□□ -0.38
PTPRF-213ENST00000481019 ADIPOR2Q86V24 386 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 ZNF683Q8IZ20 524 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 ZNF513Q8N8E2 541 aaPredicted RBP12.65□□□□□ -0.38
PTPRF-213ENST00000481019 ATP6V0D2Q8N8Y2 350 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 MSANTD4Q8NCY6 345 aa12.65□□□□□ -0.38
PTPRF-213ENST00000481019 C3orf20Q8ND61 904 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms