RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 ACSL4O60488 711 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 RNF8O76064 485 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 PROSCO94903 275 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 APOEP02649 317 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 CCDC175P0C221 793 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 MIPP30301 263 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 SLC6A4P31645 630 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 ARHGAP25P42331 645 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 IFNAR2P48551 515 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 KIF5AQ12840 1032 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 TDGQ13569 410 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 PIGHQ14442 188 aaPredicted RBP11.87□□□□□ -0.51
CBWD3-206ENST00000478048 ARHGAP29Q52LW3 1261 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 BRMS1LQ5PSV4 323 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 PIK3R6Q5UE93 754 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 CYP4V2Q6ZWL3 525 aaPredicted RBP11.87□□□□□ -0.51
CBWD3-206ENST00000478048 NIPA2Q8N8Q9 360 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 ATP6V0D2Q8N8Y2 350 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 BTN2A3PQ96KV6 586 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 DCLK3Q9C098 648 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 BRD9Q9H8M2 597 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 THG1LQ9NWX6 298 aaKnown RBP11.87□□□□□ -0.51
CBWD3-206ENST00000478048 PPP2R2CQ9Y2T4 447 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 HYOU1Q9Y4L1 999 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 PAXBP1Q9Y5B6 917 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.87□□□□□ -0.51
CBWD3-206ENST00000478048 BDP1A6H8Y1 2624 aa11.87□□□□□ -0.51
CBWD3-206ENST00000478048 MACROD2A1Z1Q3 448 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 BUB1BO60566 1050 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-206ENST00000478048 PAGE1O75459 146 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 SLC2A3P11169 496 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 IL1R2P27930 398 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 ADRA1BP35368 520 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 SLC11A2P49281 568 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 HADHBP55084 474 aaKnown RBP11.86□□□□□ -0.51
CBWD3-206ENST00000478048 MS4A13Q5J8X5 152 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 ADGRF1Q5T601 910 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 RAP1GAP2Q684P5 730 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 TXNRD3NBQ6F5E7 133 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 RFWD3Q6PCD5 774 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 RHBDF2Q6PJF5 856 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 TPGS1Q6ZTW0 290 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 TMEM25Q86YD3 366 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 FAM217AQ8IXS0 508 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 TPCN2Q8NHX9 752 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 UHRF1Q96T88 793 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-206ENST00000478048 GPATCH2LQ9NWQ4 482 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 TBC1D14Q9P2M4 693 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 MUTYHQ9UIF7 546 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 STOML2Q9UJZ1 356 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 ZNF510Q9Y2H8 683 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 HS3ST4Q9Y661 456 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 TSPAN3O60637 253 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 MOCS3O95396 460 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 CYP17A1P05093 508 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 MMP16P51512 607 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 SGSHP51688 502 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 NAP1L1P55209 391 aaKnown RBP11.86□□□□□ -0.51
CBWD3-206ENST00000478048 TAS2R40P59535 323 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 ACAP1Q15027 740 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 PDGFRLQ15198 375 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 LY6G5CQ5SRR4 150 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 C14orf80Q86SX3 495 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 PYROXD2Q8N2H3 581 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 KIAA1958Q8N8K9 716 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 IRF7Q92985 503 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 BHMTQ93088 406 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 AZIN2Q96A70 460 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 SIK2Q9H0K1 926 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 ECT2Q9H8V3 914 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 LZTFL1Q9NQ48 299 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 SLC12A6Q9UHW9 1150 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 USP18Q9UMW8 372 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 GUCA1BQ9UMX6 200 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 DUSP12Q9UNI6 340 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 SORCS3Q9UPU3 1222 aa11.86□□□□□ -0.51
CBWD3-206ENST00000478048 COL4A2P08572 1712 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 COL4A3Q01955 1670 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 FAM72CH0Y354 149 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 GFRA2O00451 464 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 SLC9A3R1O14745 358 aaPredicted RBP11.85□□□□□ -0.51
CBWD3-206ENST00000478048 LATS1O95835 1130 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 SRFP11831 508 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 DESP17661 470 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 TACR2P21452 398 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 PCK1P35558 622 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 SSR1P43307 286 aaKnown RBP11.85□□□□□ -0.51
CBWD3-206ENST00000478048 SOX9P48436 509 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 SLC25A11Q02978 314 aaKnown RBP11.85□□□□□ -0.51
CBWD3-206ENST00000478048 RUNX3Q13761 415 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 DHCR24Q15392 516 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 CA9Q16790 459 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 SMTNL2Q2TAL5 461 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 KCNT1Q5JUK3 1230 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 ARTNQ5T4W7 220 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 FAM72AQ5TYM5 149 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 FAM72DQ6L9T8 149 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 SLFN11Q7Z7L1 901 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 CHSY1Q86X52 802 aa11.85□□□□□ -0.51
CBWD3-206ENST00000478048 FAM72BQ86X60 149 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms