RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 SGSHP51688 502 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 DEUP1Q05D60 604 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
ACTN4-205ENST00000477174 ENPP2Q13822 863 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 ASIC2Q16515 512 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 USP39Q53GS9 565 aaKnown RBP13.9□□□□□ -0.18
ACTN4-205ENST00000477174 TTC39BQ5VTQ0 682 aaPredicted RBP13.9□□□□□ -0.18
ACTN4-205ENST00000477174 RAP1GAP2Q684P5 730 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 ACAD10Q6JQN1 1059 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 BNIPLQ7Z465 357 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 ADIPOR2Q86V24 386 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 CHSY1Q86X52 802 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 LGI2Q8N0V4 545 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 AHI1Q8N157 1196 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 RUBCNQ92622 972 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 SYN2Q92777 582 aaPredicted RBP13.9□□□□□ -0.18
ACTN4-205ENST00000477174 VCPIP1Q96JH7 1222 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 C1orf74Q96LT6 269 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 PRICKLE1Q96MT3 831 aaPredicted RBP13.9□□□□□ -0.18
ACTN4-205ENST00000477174 ACOX2Q99424 681 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 C11orf70Q9BRQ4 267 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 ZDHHC4Q9NPG8 344 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 PIGVQ9NUD9 493 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 ABCB8Q9NUT2 735 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 ARHGEF38Q9NXL2 777 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 IFNKQ9P0W0 207 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 CALCOCO1Q9P1Z2 691 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 STIM2Q9P246 746 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 GGA2Q9UJY4 613 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 PLA2G4CQ9UP65 541 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 FAM186AA6NE01 2351 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 A0A1W2PQF6 199 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 FAM170AA1A519 330 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 SIGLEC16A6NMB1 481 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 PAGE1O75459 146 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 ENDOD1O94919 500 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 ATP5BP06576 529 aaKnown RBP13.89□□□□□ -0.19
ACTN4-205ENST00000477174 PABPC1P11940 636 aaKnown RBP13.89□□□□□ -0.19
ACTN4-205ENST00000477174 HOXB2P14652 356 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 PDGFRAP16234 1089 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 TFE3P19532 575 aaPredicted RBP13.89□□□□□ -0.19
ACTN4-205ENST00000477174 SULT1E1P49888 294 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 KLHL30Q0D2K2 578 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 AUHQ13825 339 aaKnown RBP13.89□□□□□ -0.19
ACTN4-205ENST00000477174 RABGAP1LQ5R372 815 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 OTUD1Q5VV17 481 aaPredicted RBP13.89□□□□□ -0.19
ACTN4-205ENST00000477174 TMEM215Q68D42 235 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 ANO7Q6IWH7 933 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 FBXL22Q6P050 247 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 CEP68Q76N32 757 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 MFN1Q8IWA4 741 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 CFAP52Q8N1V2 620 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 C3orf20Q8ND61 904 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 MDGA1Q8NFP4 955 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 MYEOVQ96EZ4 313 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 LMLNQ96KR4 655 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 TBCBQ99426 244 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 ADAM33Q9BZ11 813 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 CIPCQ9C0C6 399 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 TKTL2Q9H0I9 626 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 HAUS4Q9H6D7 363 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 KIAA1522Q9P206 1035 aaPredicted RBP13.89□□□□□ -0.19
ACTN4-205ENST00000477174 CAPN11Q9UMQ6 739 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 SMG5Q9UPR3 1016 aaKnown RBP13.89□□□□□ -0.19
ACTN4-205ENST00000477174 BZW2Q9Y6E2 419 aaKnown RBP13.89□□□□□ -0.19
ACTN4-205ENST00000477174 STON1Q9Y6Q2 735 aa13.89□□□□□ -0.19
ACTN4-205ENST00000477174 MYO18AQ92614 2054 aaKnown RBP13.89□□□□□ -0.19
ACTN4-205ENST00000477174 C2CD4BA6NLJ0 364 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 WASH3PC4AMC7 463 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 H0Y626 953 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 LUC7L3O95232 432 aaKnown RBP13.88□□□□□ -0.19
ACTN4-205ENST00000477174 ADCY5O95622 1261 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 DLDP09622 509 aaKnown RBP13.88□□□□□ -0.19
ACTN4-205ENST00000477174 GZMAP12544 262 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 POLR2EP19388 210 aaKnown RBP13.88□□□□□ -0.19
ACTN4-205ENST00000477174 SDC4P31431 198 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 RDXP35241 583 aaKnown RBP13.88□□□□□ -0.19
ACTN4-205ENST00000477174 WASP42768 502 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 OXCT1P55809 520 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 ZBED6P86452 979 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 SRSF5Q13243 272 aaKnown RBP13.88□□□□□ -0.19
ACTN4-205ENST00000477174 CDH18Q13634 790 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 BYSLQ13895 437 aaKnown RBP13.88□□□□□ -0.19
ACTN4-205ENST00000477174 C5orf22Q49AR2 442 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 LAIR1Q6GTX8 287 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 TRNP1Q6NT89 227 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 PRR23BQ6ZRT6 265 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 CHST9Q7L1S5 443 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 MON1BQ7L1V2 547 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 ZNF571Q7Z3V5 609 aaPredicted RBP13.88□□□□□ -0.19
ACTN4-205ENST00000477174 PHLDB2Q86SQ0 1253 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 C11orf74Q86VG3 221 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 MCOLN2Q8IZK6 566 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 CARNMT1Q8N4J0 409 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 OLIG1Q8TAK6 271 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 RXFP2Q8WXD0 754 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 TTC17Q96AE7 1141 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 ZC3H10Q96K80 434 aaKnown RBP13.88□□□□□ -0.19
ACTN4-205ENST00000477174 CFAP57Q96MR6 1250 aa13.88□□□□□ -0.19
ACTN4-205ENST00000477174 HAPLN3Q96S86 360 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms