RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TRPV6Q9H1D0 765 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 LRRC4Q9HBW1 653 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 ARHGEF4Q9NR80 690 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 CHST12Q9NRB3 414 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 MIOSQ9NXC5 875 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 NOP53Q9NZM5 478 aaKnown RBP16.94■□□□□ 0.3
TMEM53-208ENST00000476724 KANSL3Q9P2N6 904 aa16.94■□□□□ 0.3
TMEM53-208ENST00000476724 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.94■□□□□ 0.3
TMEM53-208ENST00000476724 A0A0G2JND7 137 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 I3L4J1 428 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 DLDP09622 509 aaKnown RBP16.93■□□□□ 0.3
TMEM53-208ENST00000476724 CSH1P0DML2 217 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 CSH2P0DML3 217 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 TKTP29401 623 aaKnown RBP16.93■□□□□ 0.3
TMEM53-208ENST00000476724 MLH1P40692 756 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 CDK18Q07002 472 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 NAB1Q13506 487 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 DBN1Q16643 649 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 CTC1Q2NKJ3 1217 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 STXBP5Q5T5C0 1151 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 OSTM1Q86WC4 334 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 COLGALT1Q8NBJ5 622 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 RNF139Q8WU17 664 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 LRRN4Q8WUT4 740 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 CDKL2Q92772 493 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 TBC1D10AQ9BXI6 508 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 TLE6Q9H808 572 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 HEY2Q9UBP5 337 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 GABRDO14764 452 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 PPP1R12AO14974 1030 aaPredicted RBP16.93■□□□□ 0.3
TMEM53-208ENST00000476724 BIRC5O15392 142 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 HAUS5O94927 633 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 FBXO21O94952 628 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 MYCP01106 439 aaPredicted RBP16.93■□□□□ 0.3
TMEM53-208ENST00000476724 VAV1P15498 845 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 IBSPP21815 317 aaPredicted RBP16.93■□□□□ 0.3
TMEM53-208ENST00000476724 PAFAH1B3Q15102 231 aaKnown RBP16.93■□□□□ 0.3
TMEM53-208ENST00000476724 ZNF449Q6P9G9 518 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 CDHR3Q6ZTQ4 885 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 DENND5BQ6ZUT9 1274 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 PDZD4Q76G19 769 aaPredicted RBP16.93■□□□□ 0.3
TMEM53-208ENST00000476724 PYROXD2Q8N2H3 581 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 MPP5Q8N3R9 675 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 ACMSDQ8TDX5 336 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 DEPDC1BQ8WUY9 529 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 OXNAD1Q96HP4 312 aaPredicted RBP16.93■□□□□ 0.3
TMEM53-208ENST00000476724 PPP1R10Q96QC0 940 aaKnown RBP16.93■□□□□ 0.3
TMEM53-208ENST00000476724 SLC2A13Q96QE2 648 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 GAD1Q99259 594 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 KCNK13Q9HB14 408 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 MCM8Q9UJA3 840 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 RAD54BQ9Y620 910 aa16.93■□□□□ 0.3
TMEM53-208ENST00000476724 CYB561D2O14569 222 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 CCDC22O60826 627 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 CBX6O95503 412 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 RPLP2P05387 115 aaKnown RBP16.92■□□□□ 0.3
TMEM53-208ENST00000476724 TRMT10BQ6PF06 316 aaKnown RBP16.92■□□□□ 0.3
TMEM53-208ENST00000476724 AGMOQ6ZNB7 445 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 MARK2Q7KZI7 788 aaKnown RBP16.92■□□□□ 0.3
TMEM53-208ENST00000476724 SIX6OS1Q8N1H7 587 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 E2F7Q96AV8 911 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 TMEM120AQ9BXJ8 343 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 YY1AP1Q9H869 796 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 STARD7Q9NQZ5 370 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 SLC38A7Q9NVC3 462 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 SAGE1Q9NXZ1 904 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 SIRPGQ9P1W8 387 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.92■□□□□ 0.3
TMEM53-208ENST00000476724 A8MUI8 341 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 M0QYT0 321 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 ZBTB16Q05516 673 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 DEUP1Q05D60 604 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 KRT72Q14CN4 511 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 FAM26DQ5JW98 314 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 WASHC2DQ5SRD0 308 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 FAM91A1Q658Y4 838 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 SKA1Q96BD8 255 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 P2RY11Q96G91 374 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 NSL1Q96IY1 281 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 LGMNQ99538 433 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 TSEN34Q9BSV6 310 aaKnown RBP16.92■□□□□ 0.3
TMEM53-208ENST00000476724 SLC13A1Q9BZW2 595 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 KCNK4Q9NYG8 393 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 L3MBTL1Q9Y468 752 aa16.92■□□□□ 0.3
TMEM53-208ENST00000476724 MFSD11O43934 449 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 ANP32DO95626 131 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 ATP5BP06576 529 aaKnown RBP16.91■□□□□ 0.3
TMEM53-208ENST00000476724 CKBP12277 381 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 PGAM1P18669 254 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 GRIA1P42261 906 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 AP1B1Q10567 949 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 DSC3Q14574 896 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 FAM182AQ5T1J6 154 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 TRAF7Q6Q0C0 670 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 KYAT3Q6YP21 454 aaKnown RBP16.91■□□□□ 0.3
TMEM53-208ENST00000476724 CLEC20AQ6ZU45 233 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 PAQR9Q6ZVX9 377 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 LONP2Q86WA8 852 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 NUDCD3Q8IVD9 361 aa16.91■□□□□ 0.3
TMEM53-208ENST00000476724 NDUFAF2Q8N183 169 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms