RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 INSL6Q9Y581 213 aa5.88□□□□□ -1.47
SSR3-206ENST00000476217 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.88□□□□□ -1.471e-7■■□□□ 14.3
SSR3-206ENST00000476217 CNTNAP1P78357 1384 aa5.88□□□□□ -1.47
SSR3-206ENST00000476217 CCDC196A0A1B0GTZ2 297 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 VPS37CA5D8V6 355 aaPredicted RBP5.87□□□□□ -1.47
SSR3-206ENST00000476217 CFAP69A5D8W1 941 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 JAK2O60674 1132 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 VPS4BO75351 444 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 NXPH3O95157 252 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 SLC7A1P30825 629 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 KIF5BP33176 963 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 SHMT1P34896 483 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 DDIT3P35638 169 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 EPS15P42566 896 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 SLC11A2P49281 568 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 RCAN1P53805 252 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 HMGN5P82970 282 aaKnown RBP5.87□□□□□ -1.47
SSR3-206ENST00000476217 GABPAQ06546 454 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 CERKLQ49MI3 558 aaPredicted RBP5.87□□□□□ -1.47
SSR3-206ENST00000476217 PRR16Q569H4 304 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 PLAC9Q5JTB6 97 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 RBM20Q5T481 1227 aaKnown RBP5.87□□□□□ -1.47
SSR3-206ENST00000476217 OLFML1Q6UWY5 402 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 CCDC149Q6ZUS6 474 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 GRASPQ7Z6J2 395 aaPredicted RBP5.87□□□□□ -1.47
SSR3-206ENST00000476217 DGKHQ86XP1 1220 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 APOBEC3FQ8IUX4 373 aaKnown RBP5.87□□□□□ -1.47
SSR3-206ENST00000476217 FOXP4Q8IVH2 680 aaPredicted RBP5.87□□□□□ -1.47
SSR3-206ENST00000476217 TOR1AIP2Q8NFQ8 470 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 CTCFLQ8NI51 663 aaPredicted RBP5.87□□□□□ -1.47
SSR3-206ENST00000476217 LRTOMTQ8WZ04 291 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 ZBED3Q96IU2 234 aaPredicted RBP5.87□□□□□ -1.47
SSR3-206ENST00000476217 PBKQ96KB5 322 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 C8orf48Q96LL4 319 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 CCDC17Q96LX7 622 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 PTDSS2Q9BVG9 487 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 ZNF518BQ9C0D4 1074 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 TMEM39BQ9GZU3 492 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 GGA3Q9NZ52 723 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.87□□□□□ -1.47
SSR3-206ENST00000476217 HERC5Q9UII4 1024 aaKnown RBP5.87□□□□□ -1.47
SSR3-206ENST00000476217 HACL1Q9UJ83 578 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 FRMPD2Q68DX3 1309 aaPredicted RBP5.87□□□□□ -1.47
SSR3-206ENST00000476217 PLIN4Q96Q06 1357 aa5.87□□□□□ -1.47
SSR3-206ENST00000476217 GOLGB1Q14789 3259 aaKnown RBP5.86□□□□□ -1.47
SSR3-206ENST00000476217 NID2Q14112 1375 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 ASTN2O75129 1339 aaPredicted RBP5.86□□□□□ -1.47
SSR3-206ENST00000476217 A0A087WWL8 130 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 ZAR1LA6NP61 321 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 H3BQV1 296 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 GCOM1H8Y6P7 765 aaPredicted RBP5.86□□□□□ -1.47
SSR3-206ENST00000476217 MYO1FO00160 1098 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 BTN3A1O00481 513 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 TPP1O14773 563 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 STX6O43752 255 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 TLR5O60602 858 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 TTLL1O95922 423 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 KITP10721 976 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 TOP1P11387 765 aaKnown RBP5.86□□□□□ -1.47
SSR3-206ENST00000476217 AKR1B1P15121 316 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 GRIA3P42263 894 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 RARRES1P49788 294 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 TOB1P50616 345 aaPredicted RBP5.86□□□□□ -1.47
SSR3-206ENST00000476217 SOX10P56693 466 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 COL10A1Q03692 680 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 SLC13A2Q13183 592 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 E2F2Q14209 437 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 PPP2R5BQ15173 497 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 MGAT5BQ3V5L5 792 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 RNF220Q5VTB9 566 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 TMEM108Q6UXF1 575 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 TMEM179Q6ZVK1 233 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 FANCBQ8NB91 859 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 MYCBPAPQ8TBZ2 947 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 ATRIPQ8WXE1 791 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 PDLIM2Q96JY6 352 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 DUSP26Q9BV47 211 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 AMBRA1Q9C0C7 1298 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 DNAJC18Q9H819 358 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 ATP6V0A4Q9HBG4 840 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 IL17RBQ9NRM6 502 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 ADARB2Q9NS39 739 aaKnown RBP5.86□□□□□ -1.47
SSR3-206ENST00000476217 TCP11L1Q9NUJ3 509 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 RBM28Q9NW13 759 aaKnown RBP5.86□□□□□ -1.47
SSR3-206ENST00000476217 EHD3Q9NZN3 535 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 C11orf21Q9P2W6 132 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 ORC3Q9UBD5 711 aaPredicted RBP5.86□□□□□ -1.47
SSR3-206ENST00000476217 TLK1Q9UKI8 766 aa5.86□□□□□ -1.47
SSR3-206ENST00000476217 ISY1Q9ULR0 285 aaKnown RBP5.86□□□□□ -1.47
SSR3-206ENST00000476217 SCAF8Q9UPN6 1271 aaKnown RBP5.86□□□□□ -1.47
SSR3-206ENST00000476217 GREB1LQ9C091 1923 aaPredicted RBP5.86□□□□□ -1.47
SSR3-206ENST00000476217 FOXN3O00409 490 aaPredicted RBP5.85□□□□□ -1.47
SSR3-206ENST00000476217 CTDNEP1O95476 244 aa5.85□□□□□ -1.47
SSR3-206ENST00000476217 ONECUT2O95948 504 aa5.85□□□□□ -1.47
SSR3-206ENST00000476217 GH2P01242 217 aa5.85□□□□□ -1.47
SSR3-206ENST00000476217 SYT1P21579 422 aa5.85□□□□□ -1.47
SSR3-206ENST00000476217 UCP3P55916 312 aa5.85□□□□□ -1.47
SSR3-206ENST00000476217 AKAP17AQ02040 695 aaKnown RBP5.85□□□□□ -1.47
SSR3-206ENST00000476217 ICA1Q05084 483 aa5.85□□□□□ -1.47
SSR3-206ENST00000476217 PKP1Q13835 747 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms