RNA–Protein interactions for RNA: ENST00000475218.2

UPF3A-204, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best)

Gene UPF3A, Length 1,791 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-204ENST00000475218 OLFML1Q6UWY5 402 aa14.63□□□□□ -0.07
UPF3A-204ENST00000475218 SERPINA13PQ6UXR4 307 aa14.63□□□□□ -0.07
UPF3A-204ENST00000475218 MMS22LQ6ZRQ5 1243 aa14.63□□□□□ -0.07
UPF3A-204ENST00000475218 CACUL1Q86Y37 369 aa14.63□□□□□ -0.07
UPF3A-204ENST00000475218 C1orf131Q8NDD1 294 aaKnown RBP14.63□□□□□ -0.07
UPF3A-204ENST00000475218 DDX1Q92499 740 aaKnown RBP14.63□□□□□ -0.07
UPF3A-204ENST00000475218 TOE1Q96GM8 510 aaKnown RBP14.63□□□□□ -0.07
UPF3A-204ENST00000475218 FAM81BQ96LP2 452 aa14.63□□□□□ -0.07
UPF3A-204ENST00000475218 NAA15Q9BXJ9 866 aaKnown RBP14.63□□□□□ -0.07
UPF3A-204ENST00000475218 LHX5Q9H2C1 402 aa14.63□□□□□ -0.07
UPF3A-204ENST00000475218 MTG2Q9H4K7 406 aa14.63□□□□□ -0.07
UPF3A-204ENST00000475218 PLCB1Q9NQ66 1216 aa14.63□□□□□ -0.07
UPF3A-204ENST00000475218 FHOD1Q9Y613 1164 aa14.63□□□□□ -0.07
UPF3A-204ENST00000475218 ACACBO00763 2458 aa14.63□□□□□ -0.07
UPF3A-204ENST00000475218 TPRP12270 2363 aaKnown RBP14.63□□□□□ -0.07
UPF3A-204ENST00000475218 MOCS2O96007 188 aaPredicted RBP14.62□□□□□ -0.07
UPF3A-204ENST00000475218 CD6P30203 668 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 HOXD12P35452 270 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 ANP32AP39687 249 aaKnown RBP14.62□□□□□ -0.07
UPF3A-204ENST00000475218 DCAF6Q58WW2 860 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 RBM43Q6ZSC3 357 aaKnown RBP14.62□□□□□ -0.07
UPF3A-204ENST00000475218 FAM183BPQ6ZVS7 135 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 AHI1Q8N157 1196 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 HJURPQ8NCD3 748 aaPredicted RBP14.62□□□□□ -0.07
UPF3A-204ENST00000475218 FIBINQ8TAL6 211 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 PPP1R13BQ96KQ4 1090 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 MRGPRX3Q96LB0 322 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 PRMT1Q99873 361 aaKnown RBP14.62□□□□□ -0.07
UPF3A-204ENST00000475218 TMEM9BQ9NQ34 198 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 KMT2BQ9UMN6 2715 aaPredicted RBP14.62□□□□□ -0.07
UPF3A-204ENST00000475218 CACNA1EQ15878 2313 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 EPG5Q9HCE0 2579 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 AKAP13Q12802 2813 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 KCNU1A8MYU2 1149 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 SYNCRIPO60506 623 aaKnown RBP14.62□□□□□ -0.07
UPF3A-204ENST00000475218 DLDP09622 509 aaKnown RBP14.62□□□□□ -0.07
UPF3A-204ENST00000475218 KCNA4P22459 653 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 MAOBP27338 520 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 KCNJ12Q14500 433 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 TPD52L1Q16890 204 aaPredicted RBP14.62□□□□□ -0.07
UPF3A-204ENST00000475218 KLHDC7AQ5VTJ3 777 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 RAP1GAP2Q684P5 730 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 PSAPL1Q6NUJ1 521 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 DEFB106AQ8N104 65 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 OR2I1PQ8NGU4 316 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 OR2T3Q8NH03 318 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 TTC17Q96AE7 1141 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 SIPA1Q96FS4 1042 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 CNTNAP3BQ96NU0 1288 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 CNTNAP3Q9BZ76 1288 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 PRSS16Q9NQE7 514 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 CEP295Q9C0D2 2601 aa14.62□□□□□ -0.07
UPF3A-204ENST00000475218 GRAP2O75791 330 aa14.61□□□□□ -0.07
UPF3A-204ENST00000475218 SERPINF2P08697 491 aa14.61□□□□□ -0.07
UPF3A-204ENST00000475218 PRKCSHP14314 528 aaPredicted RBP14.61□□□□□ -0.07
UPF3A-204ENST00000475218 PMLP29590 882 aa14.61□□□□□ -0.07
UPF3A-204ENST00000475218 CTSOP43234 321 aaPredicted RBP14.61□□□□□ -0.07
UPF3A-204ENST00000475218 MAPK8P45983 427 aa14.61□□□□□ -0.07
UPF3A-204ENST00000475218 DRAP1Q14919 205 aaPredicted RBP14.61□□□□□ -0.07
UPF3A-204ENST00000475218 DUOXA1Q1HG43 343 aa14.61□□□□□ -0.07
UPF3A-204ENST00000475218 FNDC3BQ53EP0 1204 aaKnown RBP14.61□□□□□ -0.07
UPF3A-204ENST00000475218 TCP11X2Q5H9J9 407 aa14.61□□□□□ -0.07
UPF3A-204ENST00000475218 SMYD5Q6GMV2 418 aa14.61□□□□□ -0.07
UPF3A-204ENST00000475218 MFN1Q8IWA4 741 aa14.61□□□□□ -0.07
UPF3A-204ENST00000475218 GPR174Q9BXC1 333 aa14.61□□□□□ -0.07
UPF3A-204ENST00000475218 SLCO1B1Q9Y6L6 691 aa14.61□□□□□ -0.07
UPF3A-204ENST00000475218 NYNRINQ9P2P1 1898 aaKnown RBP14.6□□□□□ -0.07
UPF3A-204ENST00000475218 I6L893 689 aaPredicted RBP14.6□□□□□ -0.07
UPF3A-204ENST00000475218 CAPN9O14815 690 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 ZBTB24O43167 697 aaPredicted RBP14.6□□□□□ -0.07
UPF3A-204ENST00000475218 CFIP05156 583 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 GLI1P08151 1106 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 TFE3P19532 575 aaPredicted RBP14.6□□□□□ -0.07
UPF3A-204ENST00000475218 TACR2P21452 398 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 CSKP41240 450 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 IRAK1P51617 712 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 PTK2Q05397 1052 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 ARTNQ5T4W7 220 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 CDKAL1Q5VV42 579 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 CIR1Q86X95 450 aaPredicted RBP14.6□□□□□ -0.07
UPF3A-204ENST00000475218 FAM114A1Q8IWE2 563 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 LGI2Q8N0V4 545 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 CARNMT1Q8N4J0 409 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 C1orf216Q8TAB5 229 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 DNASE2BQ8WZ79 361 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 PRCCQ92733 491 aaPredicted RBP14.6□□□□□ -0.07
UPF3A-204ENST00000475218 TRIM62Q9BVG3 475 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 NUSAP1Q9BXS6 441 aaKnown RBP14.6□□□□□ -0.07
UPF3A-204ENST00000475218 ANLNQ9NQW6 1124 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 ASNSD1Q9NWL6 643 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 SLC6A14Q9UN76 642 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 NFE2L3Q9Y4A8 694 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 FAM170AA1A519 330 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 LUC7L3O95232 432 aaKnown RBP14.6□□□□□ -0.07
UPF3A-204ENST00000475218 CDH5P33151 784 aaPredicted RBP14.6□□□□□ -0.07
UPF3A-204ENST00000475218 KLK7P49862 253 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 RPS14P62263 151 aaKnown RBP14.6□□□□□ -0.07
UPF3A-204ENST00000475218 PITRM1Q5JRX3 1037 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 SH3PXD2AQ5TCZ1 1133 aa14.6□□□□□ -0.07
UPF3A-204ENST00000475218 C11orf57Q6ZUT1 292 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms