RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, human

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE1-222	ENST00000473373	CYB5D2	Q8WUJ1	264 aa		11.95	□□□□□ -0.5
CPNE1-222	ENST00000473373	PIWIL1	Q96J94	861 aa	Known RBP	11.95	□□□□□ -0.5
CPNE1-222	ENST00000473373	BTN2A3P	Q96KV6	586 aa		11.95	□□□□□ -0.5
CPNE1-222	ENST00000473373	FCRL2	Q96LA5	508 aa	Predicted RBP	11.95	□□□□□ -0.5
CPNE1-222	ENST00000473373	NUCKS1	Q9H1E3	243 aa	Known RBP	11.95	□□□□□ -0.5
CPNE1-222	ENST00000473373	ASNSD1	Q9NWL6	643 aa		11.95	□□□□□ -0.5
CPNE1-222	ENST00000473373	CALCOCO1	Q9P1Z2	691 aa		11.95	□□□□□ -0.5
CPNE1-222	ENST00000473373	CYP8B1	Q9UNU6	501 aa		11.95	□□□□□ -0.5
CPNE1-222	ENST00000473373	DAAM1	Q9Y4D1	1078 aa		11.95	□□□□□ -0.5
CPNE1-222	ENST00000473373	PAXBP1	Q9Y5B6	917 aa		11.95	□□□□□ -0.5
CPNE1-222	ENST00000473373	GON4L	Q3T8J9	2241 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	AP5Z1	O43299	807 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	ZNF217	O75362	1048 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	DAB1	O75553	588 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	LSM8	O95777	96 aa	Known RBP	11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	CAVIN2	O95810	425 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	IGLV3-27	P01718	113 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	FYN	P06241	537 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	CCDC172	P0C7W6	258 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	GABRG2	P18507	467 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	TACR2	P21452	398 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	SLC6A4	P31645	630 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	NOS2	P35228	1153 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	SOX5	P35711	763 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	IL12RB1	P42701	662 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	RPL34	P49207	117 aa	Known RBP	11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	SGSH	P51688	502 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	RPS24	P62847	133 aa	Known RBP	11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	TAF5	Q15542	800 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	CSRP2	Q16527	193 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	RABGAP1L	Q5R372	815 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	MBLAC2	Q68D91	279 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	IL31	Q6EBC2	164 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	SMYD5	Q6GMV2	418 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	SLC36A4	Q6YBV0	504 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	BEND5	Q7L4P6	421 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	NOP9	Q86U38	636 aa	Known RBP	11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	ZNF677	Q86XU0	584 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	TMEFF1	Q8IYR6	380 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	RGL4	Q8IZJ4	473 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	DEFB119	Q8N690	84 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	CPA5	Q8WXQ8	436 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	SORCS1	Q8WY21	1168 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	PIGK	Q92643	395 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	PRCC	Q92733	491 aa	Predicted RBP	11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	AZIN2	Q96A70	460 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	SIK2	Q9H0K1	926 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	PRDM16	Q9HAZ2	1276 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	LIMA1	Q9UHB6	759 aa	Known RBP	11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	FBXO10	Q9UK96	956 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	CLEC4E	Q9ULY5	219 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	SSUH2	Q9Y2M2	353 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	PCDHGA5	Q9Y5G8	931 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	CACNA1B	Q00975	2339 aa		11.94	□□□□□ -0.5
CPNE1-222	ENST00000473373	DOCK4	Q8N1I0	1966 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	KCNU1	A8MYU2	1149 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	GOLGA6L19	H0YKK7	550 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	SLC30A4	O14863	429 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	GDF9	O60383	454 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	SERPINC1	P01008	464 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	HLA-E	P13747	358 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	ZNF18	P17022	549 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	NDUFV2	P19404	249 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	BCKDHB	P21953	392 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	HLA-F	P30511	346 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	NNMT	P40261	264 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	P2RY2	P41231	377 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	ZNF165	P49910	485 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	DEUP1	Q05D60	604 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	MTA1	Q13330	715 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	SF3A2	Q15428	464 aa	Known RBP	11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	C2CD6	Q53TS8	623 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	FAM133B	Q5BKY9	247 aa	Known RBP	11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	MS4A13	Q5J8X5	152 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	MPP7	Q5T2T1	576 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	PMS2CL	Q68D20	193 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	NADSYN1	Q6IA69	706 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	KIAA1211L	Q6NV74	962 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	OLFML1	Q6UWY5	402 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	SLC26A9	Q7LBE3	791 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	WDTC1	Q8N5D0	677 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	NETO1	Q8TDF5	533 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	EPS8L1	Q8TE68	723 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	ZC3H10	Q96K80	434 aa	Known RBP	11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	RPRD1A	Q96P16	312 aa	Predicted RBP	11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	GABRG3	Q99928	467 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	IRX2	Q9BZI1	471 aa	Predicted RBP	11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	SLC6A17	Q9H1V8	727 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	GAN	Q9H2C0	597 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	SMOC1	Q9H4F8	434 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	WDCP	Q9H6R7	721 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	VPS45	Q9NRW7	570 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	RRN3	Q9NYV6	651 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	STOML2	Q9UJZ1	356 aa		11.93	□□□□□ -0.5
CPNE1-222	ENST00000473373	ATXN2	Q99700	1313 aa	Known RBP	11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms