RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 LRRC3Q9BY71 257 aa28.37■■■□□ 2.13
HOXB3-207ENST00000472863 USP29Q9HBJ7 922 aa28.37■■■□□ 2.13
HOXB3-207ENST00000472863 CCL16O15467 120 aa28.36■■■□□ 2.13
HOXB3-207ENST00000472863 OAS1P00973 400 aaKnown RBP28.36■■■□□ 2.13
HOXB3-207ENST00000472863 RING1Q06587 406 aa28.36■■■□□ 2.13
HOXB3-207ENST00000472863 MS4A13Q5J8X5 152 aa28.36■■■□□ 2.13
HOXB3-207ENST00000472863 MANEALQ5VSG8 457 aa28.36■■■□□ 2.13
HOXB3-207ENST00000472863 ATP6V0D2Q8N8Y2 350 aa28.36■■■□□ 2.13
HOXB3-207ENST00000472863 BTN2A3PQ96KV6 586 aa28.36■■■□□ 2.13
HOXB3-207ENST00000472863 NKX2-4Q9H2Z4 354 aa28.36■■■□□ 2.13
HOXB3-207ENST00000472863 GKN1Q9NS71 199 aa28.36■■■□□ 2.13
HOXB3-207ENST00000472863 ZDHHC18Q9NUE0 388 aa28.36■■■□□ 2.13
HOXB3-207ENST00000472863 SLC12A6Q9UHW9 1150 aa28.36■■■□□ 2.13
HOXB3-207ENST00000472863 HBS1LQ9Y450 684 aaKnown RBP28.36■■■□□ 2.13
HOXB3-207ENST00000472863 MTCL1Q9Y4B5 1905 aaKnown RBP28.36■■■□□ 2.13
HOXB3-207ENST00000472863 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.35■■■□□ 2.13
HOXB3-207ENST00000472863 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.35■■■□□ 2.13
HOXB3-207ENST00000472863 TP73O15350 636 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 CLASP2O75122 1294 aaKnown RBP28.35■■■□□ 2.13
HOXB3-207ENST00000472863 EPCAMP16422 314 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 RBL1P28749 1068 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 TUBP50607 506 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 GAREM2Q75VX8 874 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 NPWQ8N729 165 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 FBXO25Q8TCJ0 367 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 OLFM3Q96PB7 478 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 CYP2S1Q96SQ9 504 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 E9PAM4 449 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 RFPL2O75678 378 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 GABRR2P28476 465 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 KPNA1P52294 538 aaPredicted RBP28.35■■■□□ 2.13
HOXB3-207ENST00000472863 PPM1LQ5SGD2 360 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 TMC8Q8IU68 726 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 SLC22A12Q96S37 553 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 MAN1C1Q9NR34 630 aa28.35■■■□□ 2.13
HOXB3-207ENST00000472863 H0YGN5 161 aa28.34■■■□□ 2.13
HOXB3-207ENST00000472863 STIP1P31948 543 aaKnown RBP28.34■■■□□ 2.13
HOXB3-207ENST00000472863 XRCC4Q13426 336 aa28.34■■■□□ 2.13
HOXB3-207ENST00000472863 AUHQ13825 339 aaKnown RBP28.34■■■□□ 2.13
HOXB3-207ENST00000472863 PABPC1LQ4VXU2 614 aaKnown RBP28.34■■■□□ 2.13
HOXB3-207ENST00000472863 TXNDC8Q6A555 127 aa28.34■■■□□ 2.13
HOXB3-207ENST00000472863 RBM23Q86U06 439 aaKnown RBP28.34■■■□□ 2.13
HOXB3-207ENST00000472863 SNF8Q96H20 258 aa28.34■■■□□ 2.13
HOXB3-207ENST00000472863 LGMNQ99538 433 aa28.34■■■□□ 2.13
HOXB3-207ENST00000472863 PCDH9Q9HC56 1237 aa28.34■■■□□ 2.13
HOXB3-207ENST00000472863 TRPC7Q9HCX4 862 aa28.34■■■□□ 2.13
HOXB3-207ENST00000472863 VANGL2Q9ULK5 521 aa28.34■■■□□ 2.13
HOXB3-207ENST00000472863 DOCK6Q96HP0 2047 aa28.34■■■□□ 2.13
HOXB3-207ENST00000472863 BCLAF3A2AJT9 711 aaKnown RBP28.33■■■□□ 2.13
HOXB3-207ENST00000472863 NRG2O14511 850 aaPredicted RBP28.33■■■□□ 2.13
HOXB3-207ENST00000472863 KCNN4O15554 427 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 GPS1Q13098 491 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 EMBQ6PCB8 327 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 TBC1D31Q96DN5 1066 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 MPP6Q9NZW5 540 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 WHRNQ9P202 907 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 NUP205Q92621 2012 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 HOXC13P31276 330 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 TNNT3P45378 269 aaPredicted RBP28.33■■■□□ 2.13
HOXB3-207ENST00000472863 NRG1Q02297 640 aaPredicted RBP28.33■■■□□ 2.13
HOXB3-207ENST00000472863 P3H1Q32P28 736 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 ZNF683Q8IZ20 524 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 ELMOD1Q8N336 334 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 ARNTL2Q8WYA1 636 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 ART4Q93070 314 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 CORO1BQ9BR76 489 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 FUT8Q9BYC5 575 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 HCFC1R1Q9NWW0 138 aa28.33■■■□□ 2.13
HOXB3-207ENST00000472863 GOLGA6L7A0A1B0GV03 622 aa28.32■■■□□ 2.12
HOXB3-207ENST00000472863 ITIH2P19823 946 aa28.32■■■□□ 2.12
HOXB3-207ENST00000472863 RPL22P35268 128 aaKnown RBP28.32■■■□□ 2.12
HOXB3-207ENST00000472863 COG7P83436 770 aa28.32■■■□□ 2.12
HOXB3-207ENST00000472863 CYP4F8P98187 520 aa28.32■■■□□ 2.12
HOXB3-207ENST00000472863 SLC45A4Q5BKX6 768 aa28.32■■■□□ 2.12
HOXB3-207ENST00000472863 RAP1GAP2Q684P5 730 aa28.32■■■□□ 2.12
HOXB3-207ENST00000472863 NUGGCQ68CJ6 796 aa28.32■■■□□ 2.12
HOXB3-207ENST00000472863 BZW1Q7L1Q6 419 aaKnown RBP28.32■■■□□ 2.12
HOXB3-207ENST00000472863 ADGRD2Q7Z7M1 963 aa28.32■■■□□ 2.12
HOXB3-207ENST00000472863 GJA1P17302 382 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 ITGA8P53708 1063 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 CALCOCO2Q13137 446 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 NADSYN1Q6IA69 706 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 CCHCR1Q8TD31 782 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP28.31■■■□□ 2.123e-7■■■■■ 68.6
HOXB3-207ENST00000472863 KLF16Q9BXK1 252 aaPredicted RBP28.31■■■□□ 2.12
HOXB3-207ENST00000472863 ADAM7Q9H2U9 754 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 PRDM12Q9H4Q4 367 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 SMPD4Q9NXE4 827 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 MSRAQ9UJ68 235 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 IRAK1P51617 712 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 PPP2R2DQ66LE6 453 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 PDE12Q6L8Q7 609 aaKnown RBP28.31■■■□□ 2.12
HOXB3-207ENST00000472863 CDKL3Q8IVW4 592 aaPredicted RBP28.31■■■□□ 2.12
HOXB3-207ENST00000472863 TNS4Q8IZW8 715 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 TAB3Q8N5C8 712 aaPredicted RBP28.31■■■□□ 2.12
HOXB3-207ENST00000472863 ARL14EPQ8N8R7 260 aaPredicted RBP28.31■■■□□ 2.12
HOXB3-207ENST00000472863 TFB1MQ8WVM0 346 aaKnown RBP28.31■■■□□ 2.12
HOXB3-207ENST00000472863 CAVIN3Q969G5 261 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 WBP2Q969T9 261 aa28.31■■■□□ 2.12
HOXB3-207ENST00000472863 CELF6Q96J87 481 aaKnown RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms