RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 HYIQ5T013 277 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 KRT79Q5XKE5 535 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 SDE2Q6IQ49 451 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 IL27RAQ6UWB1 636 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 PAQR9Q6ZVX9 377 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 GPBP1Q86WP2 473 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 TMEM86AQ8N2M4 240 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 RBBP8NLQ8NC74 664 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-209ENST00000469511 OR5B17Q8NGF7 314 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 SCFD1Q8WVM8 642 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 KCNN1Q92952 543 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 IGSF8Q969P0 613 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 SIPA1Q96FS4 1042 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 CNDP2Q96KP4 475 aaKnown RBP5.58□□□□□ -1.52
PTPN4-209ENST00000469511 C8orf48Q96LL4 319 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 SLC6A18Q96N87 628 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 TSPAN18Q96SJ8 248 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 LGMNQ99538 433 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 KIF2CQ99661 725 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 FAM213AQ9BRX8 229 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 BBS2Q9BXC9 721 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 B3GNT5Q9BYG0 378 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 FGFBP2Q9BYJ0 223 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 MTMR12Q9C0I1 747 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 ZHX3Q9H4I2 956 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 MTG2Q9H4K7 406 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 PDE11AQ9HCR9 933 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 IGSF5Q9NSI5 407 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 OSER1Q9NX31 292 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 TBC1D14Q9P2M4 693 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 THAP10Q9P2Z0 257 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-209ENST00000469511 FBXO10Q9UK96 956 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-209ENST00000469511 SH3BP1Q9Y3L3 701 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 NFE2L3Q9Y4A8 694 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 LRRK2Q5S007 2527 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 CREBBPQ92793 2442 aa5.58□□□□□ -1.52
PTPN4-209ENST00000469511 USP9YO00507 2555 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-209ENST00000469511 A0A1W2PNU3 283 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-209ENST00000469511 TERTO14746 1132 aaKnown RBP5.57□□□□□ -1.52
PTPN4-209ENST00000469511 CASC3O15234 703 aaKnown RBP5.57□□□□□ -1.52
PTPN4-209ENST00000469511 PAPSS1O43252 624 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-209ENST00000469511 TSPAN3O60637 253 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 SIN3BO75182 1162 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 RFPL3O75679 317 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 FSBPO95073 299 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 CST3P01034 146 aaPredicted RBP5.57□□□□□ -1.52
PTPN4-209ENST00000469511 IGLV3-19P01714 112 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 KLKB1P03952 638 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 ZDHHC11BP0C7U3 371 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 ARAFP10398 606 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 BMP4P12644 408 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 EDN3P14138 238 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 PFKLP17858 780 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 MX2P20592 715 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 ANXA13P27216 316 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 YWHAQP27348 245 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 PCSK1P29120 753 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 LHX1P48742 406 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 DGKGP49619 791 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 CSRP3P50461 194 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 CCT8P50990 548 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 AFF3P51826 1226 aaKnown RBP5.57□□□□□ -1.52
PTPN4-209ENST00000469511 ZNF131P52739 623 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 MFAP3P55082 362 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 RHDQ02161 417 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 GRIN1Q05586 938 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 NFATC3Q12968 1075 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 TRIM29Q14134 588 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 ZNF234Q14588 700 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 PCSK7Q16549 785 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 KYAT1Q16773 422 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 LINC00303Q3SY05 128 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTPN4-209ENST00000469511 HECTD3Q5T447 861 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 TDRD10Q5VZ19 366 aaKnown RBP5.57□□□□□ -1.52
PTPN4-209ENST00000469511 VSTM1Q6UX27 236 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 KDM7AQ6ZMT4 941 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 C4orf50Q6ZRC1 276 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 HTR3DQ70Z44 454 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 HS2ST1Q7LGA3 356 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 KANSL1Q7Z3B3 1105 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 SYT9Q86SS6 491 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 BRSK2Q8IWQ3 736 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 NUP93Q8N1F7 819 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 TOP6BLQ8N6T0 577 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 KIAA1958Q8N8K9 716 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 ZMIZ2Q8NF64 920 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 MYCBPAPQ8TBZ2 947 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 EPS8L3Q8TE67 593 aaKnown RBP5.57□□□□□ -1.52
PTPN4-209ENST00000469511 SAP25Q8TEE9 199 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 POMGNT1Q8WZA1 660 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 FBXO32Q969P5 355 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 OTUB2Q96DC9 234 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 MED8Q96G25 268 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 WBP1Q96G27 269 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 HIC2Q96JB3 615 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 ZNF560Q96MR9 790 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 NUP58Q9BVL2 599 aa5.57□□□□□ -1.52
PTPN4-209ENST00000469511 TIPINQ9BVW5 301 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms