RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 KRT5P13647 590 aa25.44■■□□□ 1.66
PTCH1-210ENST00000468211 GNSP15586 552 aa25.44■■□□□ 1.66
PTCH1-210ENST00000468211 SLC11A2P49281 568 aa25.44■■□□□ 1.66
PTCH1-210ENST00000468211 MPP7Q5T2T1 576 aa25.44■■□□□ 1.66
PTCH1-210ENST00000468211 ADAM33Q9BZ11 813 aa25.44■■□□□ 1.66
PTCH1-210ENST00000468211 MTG2Q9H4K7 406 aa25.44■■□□□ 1.66
PTCH1-210ENST00000468211 UBE2TQ9NPD8 197 aaPredicted RBP25.44■■□□□ 1.66
PTCH1-210ENST00000468211 ST7Q9NRC1 585 aa25.44■■□□□ 1.66
PTCH1-210ENST00000468211 CYTH4Q9UIA0 394 aa25.44■■□□□ 1.66
PTCH1-210ENST00000468211 NFE2L3Q9Y4A8 694 aa25.44■■□□□ 1.66
PTCH1-210ENST00000468211 TMEM131Q92545 1883 aa25.44■■□□□ 1.66
PTCH1-210ENST00000468211 SPEGQ15772 3267 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 A0A1B0GTW7 788 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 HYAL3O43820 417 aaPredicted RBP25.43■■□□□ 1.66
PTCH1-210ENST00000468211 GNA14O95837 355 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 DLDP09622 509 aaKnown RBP25.43■■□□□ 1.66
PTCH1-210ENST00000468211 C7P10643 843 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 RPS24P62847 133 aaKnown RBP25.43■■□□□ 1.66
PTCH1-210ENST00000468211 BNC1Q01954 994 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 SYPL2Q5VXT5 272 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 GJB7Q6PEY0 223 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 C1orf216Q8TAB5 229 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 GOLGA1Q92805 767 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 AZIN2Q96A70 460 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 SLC39A13Q96H72 371 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 MED15Q96RN5 788 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 LHX5Q9H2C1 402 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 PRSS16Q9NQE7 514 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 EIF2B4Q9UI10 523 aaKnown RBP25.43■■□□□ 1.66
PTCH1-210ENST00000468211 WDFY3Q8IZQ1 3526 aa25.43■■□□□ 1.66
PTCH1-210ENST00000468211 NYNRINQ9P2P1 1898 aaKnown RBP25.43■■□□□ 1.66
PTCH1-210ENST00000468211 SH3BP5O60239 455 aa25.42■■□□□ 1.66
PTCH1-210ENST00000468211 ACSL1P33121 698 aa25.42■■□□□ 1.66
PTCH1-210ENST00000468211 RPS14P62263 151 aaKnown RBP25.42■■□□□ 1.66
PTCH1-210ENST00000468211 APBA1Q02410 837 aa25.42■■□□□ 1.66
PTCH1-210ENST00000468211 MYO19Q96H55 970 aa25.42■■□□□ 1.66
PTCH1-210ENST00000468211 SLC4A5Q9BY07 1137 aa25.42■■□□□ 1.66
PTCH1-210ENST00000468211 NUCKS1Q9H1E3 243 aaKnown RBP25.42■■□□□ 1.66
PTCH1-210ENST00000468211 C6orf106Q9H6K1 298 aaPredicted RBP25.42■■□□□ 1.66
PTCH1-210ENST00000468211 XPO7Q9UIA9 1087 aaKnown RBP25.42■■□□□ 1.66
PTCH1-210ENST00000468211 INTS6Q9UL03 887 aaKnown RBP25.42■■□□□ 1.66
PTCH1-210ENST00000468211 ZZEF1O43149 2961 aa25.41■■□□□ 1.66
PTCH1-210ENST00000468211 IRAK2O43187 625 aa25.41■■□□□ 1.66
PTCH1-210ENST00000468211 PAPSS1O43252 624 aaPredicted RBP25.41■■□□□ 1.66
PTCH1-210ENST00000468211 LETM1O95202 739 aaPredicted RBP25.41■■□□□ 1.66
PTCH1-210ENST00000468211 POLR2EP19388 210 aaKnown RBP25.41■■□□□ 1.66
PTCH1-210ENST00000468211 TAC4Q86UU9 113 aa25.41■■□□□ 1.66
PTCH1-210ENST00000468211 MFN1Q8IWA4 741 aa25.41■■□□□ 1.66
PTCH1-210ENST00000468211 CFAP52Q8N1V2 620 aa25.41■■□□□ 1.66
PTCH1-210ENST00000468211 FIBINQ8TAL6 211 aa25.41■■□□□ 1.66
PTCH1-210ENST00000468211 ZNF606Q8WXB4 792 aa25.41■■□□□ 1.66
PTCH1-210ENST00000468211 GATA6Q92908 595 aa25.41■■□□□ 1.66
PTCH1-210ENST00000468211 FAM149B1Q96BN6 582 aa25.41■■□□□ 1.66
PTCH1-210ENST00000468211 SERPINB11Q96P15 392 aa25.41■■□□□ 1.66
PTCH1-210ENST00000468211 CRACR2AQ9BSW2 395 aa25.41■■□□□ 1.66
PTCH1-210ENST00000468211 IRX2Q9BZI1 471 aaPredicted RBP25.41■■□□□ 1.66
PTCH1-210ENST00000468211 IL21RQ9HBE5 538 aa25.41■■□□□ 1.66
PTCH1-210ENST00000468211 TLR6Q9Y2C9 796 aa25.41■■□□□ 1.66
PTCH1-210ENST00000468211 PITX1P78337 314 aaPredicted RBP25.4■■□□□ 1.66
PTCH1-210ENST00000468211 SLC14A1Q13336 389 aa25.4■■□□□ 1.66
PTCH1-210ENST00000468211 FSCBQ5H9T9 825 aa25.4■■□□□ 1.66
PTCH1-210ENST00000468211 MMS22LQ6ZRQ5 1243 aa25.4■■□□□ 1.66
PTCH1-210ENST00000468211 HJURPQ8NCD3 748 aaPredicted RBP25.4■■□□□ 1.66
PTCH1-210ENST00000468211 TJP2Q9UDY2 1190 aa25.4■■□□□ 1.66
PTCH1-210ENST00000468211 KLK13Q9UKR3 277 aa25.4■■□□□ 1.66
PTCH1-210ENST00000468211 TP53BP1Q12888 1972 aaPredicted RBP25.4■■□□□ 1.66
PTCH1-210ENST00000468211 BECN2A8MW95 431 aa25.39■■□□□ 1.66
PTCH1-210ENST00000468211 E5RJQ4 531 aa25.39■■□□□ 1.66
PTCH1-210ENST00000468211 BCAT2O15382 392 aaPredicted RBP25.39■■□□□ 1.66
PTCH1-210ENST00000468211 MOCS2O96007 188 aaPredicted RBP25.39■■□□□ 1.66
PTCH1-210ENST00000468211 ATP5BP06576 529 aaKnown RBP25.39■■□□□ 1.66
PTCH1-210ENST00000468211 NNTQ13423 1086 aa25.39■■□□□ 1.66
PTCH1-210ENST00000468211 MS4A13Q5J8X5 152 aa25.39■■□□□ 1.66
PTCH1-210ENST00000468211 CARNMT1Q8N4J0 409 aa25.39■■□□□ 1.66
PTCH1-210ENST00000468211 TTC17Q96AE7 1141 aa25.39■■□□□ 1.66
PTCH1-210ENST00000468211 MRGPRX3Q96LB0 322 aa25.39■■□□□ 1.66
PTCH1-210ENST00000468211 PLXNA2O75051 1894 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 THAP12O43422 761 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 SLC9A1P19634 815 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 CSKP41240 450 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 ACADSBP45954 432 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 TAF5Q15542 800 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 CAMK4Q16566 473 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 DCAF6Q58WW2 860 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 TRIM65Q6PJ69 517 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 TMEM110Q86TL2 294 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 NAXDQ8IW45 347 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 STK32AQ8WU08 396 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 ZDHHC5Q9C0B5 715 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 ZMIZ1Q9ULJ6 1067 aa25.38■■□□□ 1.65
PTCH1-210ENST00000468211 CABIN1Q9Y6J0 2220 aa25.37■■□□□ 1.65
PTCH1-210ENST00000468211 SART1O43290 800 aaKnown RBP25.37■■□□□ 1.65
PTCH1-210ENST00000468211 GNA15P30679 374 aa25.37■■□□□ 1.65
PTCH1-210ENST00000468211 CTSOP43234 321 aaPredicted RBP25.37■■□□□ 1.65
PTCH1-210ENST00000468211 ZC3H12AQ5D1E8 599 aaKnown RBP25.37■■□□□ 1.65
PTCH1-210ENST00000468211 BEND5Q7L4P6 421 aa25.37■■□□□ 1.65
PTCH1-210ENST00000468211 IRF2BP1Q8IU81 584 aa25.37■■□□□ 1.65
PTCH1-210ENST00000468211 CHCHD4Q8N4Q1 142 aa25.37■■□□□ 1.65
PTCH1-210ENST00000468211 KDF1Q8NAX2 398 aaPredicted RBP25.37■■□□□ 1.65
PTCH1-210ENST00000468211 SNX19Q92543 992 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms