RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 GLT6D1Q7Z4J2 308 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 GPR142Q7Z601 462 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 GPR141Q7Z602 305 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 ANKRD23Q86SG2 305 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 USP38Q8NB14 1042 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 DNAJB3Q8WWF6 145 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 NACC2Q96BF6 587 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 ERLEC1Q96DZ1 483 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 IL17RAQ96F46 866 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 SMARCD1Q96GM5 515 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 GINS4Q9BRT9 223 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 DPY30Q9C005 99 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 ISCUQ9H1K1 167 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 RSPH9Q9H1X1 276 aaPredicted RBP8.91□□□□□ -0.98
HPS4-209ENST00000466781 EFCAB1Q9HAE3 211 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 CYP3A43Q9HB55 503 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 PRKAG3Q9UGI9 489 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 DUSP12Q9UNI6 340 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 SLCO1B7G3V0H7 640 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 RAMP2O60895 175 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 MAP3K6O95382 1288 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 OR1E1P30953 314 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 MLH1P40692 756 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 FBXO47Q5MNV8 452 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 BNC2Q6ZN30 1099 aaPredicted RBP8.91□□□□□ -0.98
HPS4-209ENST00000466781 ARID3BQ8IVW6 561 aaPredicted RBP8.91□□□□□ -0.98
HPS4-209ENST00000466781 SH2D3CQ8N5H7 860 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 TERB1Q8NA31 727 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 NKX2-3Q8TAU0 364 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 SUSD6Q92537 303 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 TRIM10Q9UDY6 481 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 GTF3C4Q9UKN8 822 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 TRPV2Q9Y5S1 764 aa8.91□□□□□ -0.98
HPS4-209ENST00000466781 SMIM31A0A1B0GVY4 71 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 NCAM2O15394 837 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 GNRH1P01148 92 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 ZNF7P17097 686 aaPredicted RBP8.9□□□□□ -0.98
HPS4-209ENST00000466781 AMD1P17707 334 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 THOP1P52888 689 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 CREMQ03060 361 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 VAC14Q08AM6 782 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 LAMTOR4Q0VGL1 99 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 CRYMQ14894 314 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 MOXD1Q6UVY6 613 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 CASP12Q6UXS9 341 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 ILDR2Q71H61 639 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 CACUL1Q86Y37 369 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 COLGALT2Q8IYK4 626 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 DNAJC9Q8WXX5 260 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 ZSWIM1Q9BR11 485 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 FDXACB1Q9BRP7 624 aaPredicted RBP8.9□□□□□ -0.98
HPS4-209ENST00000466781 EPS8L2Q9H6S3 715 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 GPN3Q9UHW5 284 aaPredicted RBP8.9□□□□□ -0.98
HPS4-209ENST00000466781 VANGL2Q9ULK5 521 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 MROH7Q68CQ1 1323 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 ERI2A8K979 691 aaKnown RBP8.9□□□□□ -0.98
HPS4-209ENST00000466781 TRIM24O15164 1050 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 KATNA1O75449 491 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 CSDE1O75534 798 aaKnown RBP8.9□□□□□ -0.98
HPS4-209ENST00000466781 ITGAXP20702 1163 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 ILF2Q12905 390 aaKnown RBP8.9□□□□□ -0.98
HPS4-209ENST00000466781 MAP2K5Q13163 448 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 KCNT1Q5JUK3 1230 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 MARC1Q5VT66 337 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 FAM228AQ86W67 206 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 SLC13A5Q86YT5 568 aaPredicted RBP8.9□□□□□ -0.98
HPS4-209ENST00000466781 DENND6AQ8IWF6 608 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 DSELQ8IZU8 1212 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 KLHL31Q9H511 634 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 FAM20BO75063 409 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 HLA-DQA2P01906 255 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 SERPINF2P08697 491 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 TGFB3P10600 412 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 TYMPP19971 482 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 CYP2F1P24903 491 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 IFNGR2P38484 337 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 BCL2L1Q07817 233 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 SPIDRQ14159 915 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 CYP2A13Q16696 494 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 ERMARDQ5T6L9 678 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 SLC25A24Q6NUK1 477 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 PRR23CQ6ZRP0 262 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 MOB2Q70IA6 237 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 C16orf59Q7L2K0 433 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 SRLQ86TD4 932 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 FAM131BQ86XD5 332 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 ZNF557Q8N988 423 aaPredicted RBP8.9□□□□□ -0.98
HPS4-209ENST00000466781 COLGALT1Q8NBJ5 622 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 TRPC4APQ8TEL6 797 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 CAPNS2Q96L46 248 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 WDR24Q96S15 920 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 CBWD1Q9BRT8 395 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 RAD21L1Q9H4I0 556 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 VIPAS39Q9H9C1 493 aa8.9□□□□□ -0.98
HPS4-209ENST00000466781 MRPL39Q9NYK5 338 aaKnown RBP8.9□□□□□ -0.98
HPS4-209ENST00000466781 SAC3D1A6NKF1 404 aa8.9□□□□□ -0.99
HPS4-209ENST00000466781 IRF6O14896 467 aa8.9□□□□□ -0.99
HPS4-209ENST00000466781 MED24O75448 989 aa8.9□□□□□ -0.99
HPS4-209ENST00000466781 JCHAINP01591 159 aa8.9□□□□□ -0.99
HPS4-209ENST00000466781 ATP5BP06576 529 aaKnown RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms