RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 NACA2Q9H009 215 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 SMG9Q9H0W8 520 aaKnown RBP10.69□□□□□ -0.7
USP39-210ENST00000459775 TLR8Q9NR97 1041 aaKnown RBP10.69□□□□□ -0.7
USP39-210ENST00000459775 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.69□□□□□ -0.7
USP39-210ENST00000459775 DNMT3BQ9UBC3 853 aaKnown RBP10.69□□□□□ -0.7
USP39-210ENST00000459775 HSFX1Q9UBD0 423 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 RASAL2Q9UJF2 1139 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 FAM50BQ9Y247 325 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 PATJQ8NI35 1801 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 DOCK6Q96HP0 2047 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 CCDC163A0A0D9SF12 145 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 LRRD1A4D1F6 860 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 COCHO43405 550 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 GLP2RO95838 553 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 F11P03951 625 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 KRT1P04264 644 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 CTNNA2P26232 953 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 RWDD2BP57060 319 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 ZXDBP98169 803 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 HYAL1Q12794 435 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 CBX2Q14781 532 aaPredicted RBP10.69□□□□□ -0.7
USP39-210ENST00000459775 DUSP6Q16828 381 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 PPP6R3Q5H9R7 873 aaPredicted RBP10.69□□□□□ -0.7
USP39-210ENST00000459775 KAZNQ674X7 775 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 ALKBH2Q6NS38 261 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 CCDC149Q6ZUS6 474 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 ARCQ7LC44 396 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 GRASPQ7Z6J2 395 aaPredicted RBP10.69□□□□□ -0.7
USP39-210ENST00000459775 CCDC50Q8IVM0 306 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 GOLGA6L1Q8N7Z2 621 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 LRRN4Q8WUT4 740 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 RNF34Q969K3 372 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 ZNF707Q96C28 371 aaPredicted RBP10.69□□□□□ -0.7
USP39-210ENST00000459775 HINFPQ9BQA5 517 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 CARD6Q9BX69 1037 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 PLEKHA4Q9H4M7 779 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 SAE1Q9UBE0 346 aaPredicted RBP10.69□□□□□ -0.7
USP39-210ENST00000459775 CDC23Q9UJX2 597 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 STAP1Q9ULZ2 295 aa10.69□□□□□ -0.7
USP39-210ENST00000459775 TCF20Q9UGU0 1960 aaKnown RBP10.68□□□□□ -0.7
USP39-210ENST00000459775 C3orf70A6NLC5 250 aaPredicted RBP10.68□□□□□ -0.7
USP39-210ENST00000459775 ENDOD1O94919 500 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 IGLV3-25P01717 112 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 RDXP35241 583 aaKnown RBP10.68□□□□□ -0.7
USP39-210ENST00000459775 PCK1P35558 622 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 DLX2Q07687 328 aaPredicted RBP10.68□□□□□ -0.7
USP39-210ENST00000459775 COX10Q12887 443 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 AP1ARQ63HQ0 302 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 B4GALNT4Q76KP1 1039 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 CCDC33Q8N5R6 958 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 UBL4BQ8N7F7 174 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 ARL14EPQ8N8R7 260 aaPredicted RBP10.68□□□□□ -0.7
USP39-210ENST00000459775 MAB21L3Q8N8X9 362 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 ING5Q8WYH8 240 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 TKTL2Q9H0I9 626 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 ATXN3LQ9H3M9 355 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 DHX35Q9H5Z1 703 aaKnown RBP10.68□□□□□ -0.7
USP39-210ENST00000459775 QPCTLQ9NXS2 382 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 TRPM5Q9NZQ8 1165 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 MARCH2Q9P0N8 246 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 MFHAS1Q9Y4C4 1052 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 ATG2AQ2TAZ0 1938 aa10.68□□□□□ -0.7
USP39-210ENST00000459775 SLC12A8A0AV02 714 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 A6NJY4 79 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 MIF4GDA9UHW6 222 aaKnown RBP10.67□□□□□ -0.7
USP39-210ENST00000459775 IRAK2O43187 625 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 MAP3K6O95382 1288 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 FGGP02679 453 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 IRF1P10914 325 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 RALAP11233 206 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 MYCLP1P12525 358 aaPredicted RBP10.67□□□□□ -0.7
USP39-210ENST00000459775 ZNF24P17028 368 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 GNALP38405 381 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 NUMBP49757 651 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 DYNLT1P63172 113 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 EIF4EBP2Q13542 120 aaPredicted RBP10.67□□□□□ -0.7
USP39-210ENST00000459775 KCNC3Q14003 757 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 NAA30Q147X3 362 aaPredicted RBP10.67□□□□□ -0.7
USP39-210ENST00000459775 STRADAQ7RTN6 431 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 GJD3Q8N144 294 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 KCTD6Q8NC69 237 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 TBC1D20Q96BZ9 403 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 HAUS1Q96CS2 278 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 KCTD15Q96SI1 283 aaPredicted RBP10.67□□□□□ -0.7
USP39-210ENST00000459775 YIPF2Q9BWQ6 316 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 CALN1Q9BXU9 219 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 MAK16Q9BXY0 300 aaKnown RBP10.67□□□□□ -0.7
USP39-210ENST00000459775 SIK2Q9H0K1 926 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 SMOC2Q9H3U7 446 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 WDCPQ9H6R7 721 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 UBE2ZQ9H832 354 aaPredicted RBP10.67□□□□□ -0.7
USP39-210ENST00000459775 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.67□□□□□ -0.7
USP39-210ENST00000459775 AP4E1Q9UPM8 1137 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 V9GYY5 206 aaPredicted RBP10.67□□□□□ -0.7
USP39-210ENST00000459775 MYO16Q9Y6X6 1858 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 GREB1Q4ZG55 1949 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 PRRC2BQ5JSZ5 2229 aaKnown RBP10.67□□□□□ -0.7
USP39-210ENST00000459775 PSTPIP1O43586 416 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 MOSPD3O75425 235 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 KIAA0754O94854 1291 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms