RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 LOXL4Q96JB6 756 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 ACOX2Q99424 681 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 AGPAT1Q99943 283 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 TPSD1Q9BZJ3 242 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 NUCKS1Q9H1E3 243 aaKnown RBP17.97■□□□□ 0.47
USP39-208ENST00000455732 SLC12A6Q9UHW9 1150 aa17.97■□□□□ 0.47
USP39-208ENST00000455732 XPO7Q9UIA9 1087 aaKnown RBP17.97■□□□□ 0.47
USP39-208ENST00000455732 PI4KAP42356 2102 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 LAMA1P25391 3075 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 TYW5A2RUC4 315 aaKnown RBP17.96■□□□□ 0.47
USP39-208ENST00000455732 M0QYT0 321 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 DCLK1O15075 740 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 ABCB4P21439 1286 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 HLA-FP30511 346 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 NTSR1P30989 418 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 FLT3P36888 993 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 UBASH3AP57075 661 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 E2F5Q15329 346 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 SLC25A52Q3SY17 297 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 C2CD6Q53TS8 623 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 LRSAM1Q6UWE0 723 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 BNIPLQ7Z465 357 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 KIAA0907Q7Z7F0 614 aaPredicted RBP17.96■□□□□ 0.47
USP39-208ENST00000455732 WFIKKN2Q8TEU8 576 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 PRMT1Q99873 361 aaKnown RBP17.96■□□□□ 0.47
USP39-208ENST00000455732 GABRG3Q99928 467 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 C11orf70Q9BRQ4 267 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 ADAM33Q9BZ11 813 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 DUSP15Q9H1R2 295 aaPredicted RBP17.96■□□□□ 0.47
USP39-208ENST00000455732 CD248Q9HCU0 757 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 POLMQ9NP87 494 aaPredicted RBP17.96■□□□□ 0.47
USP39-208ENST00000455732 AIPL1Q9NZN9 384 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 CALCOCO1Q9P1Z2 691 aa17.96■□□□□ 0.47
USP39-208ENST00000455732 A0A1W2PQF6 199 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 A0A1W2PQJ5 194 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 GOLGA8SH3BPF8 625 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 TBL1XO60907 577 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 ALDH1A2O94788 518 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 EPN2O95208 641 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 F9P00740 461 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 PRKCIP41743 596 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 CXCR3P49682 368 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 SULT1E1P49888 294 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 RNASE9P60153 205 aaKnown RBP17.95■□□□□ 0.46
USP39-208ENST00000455732 NME3Q13232 169 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 USP39Q53GS9 565 aaKnown RBP17.95■□□□□ 0.46
USP39-208ENST00000455732 BRMS1LQ5PSV4 323 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 PPP1R2P3Q6NXS1 205 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 MON1BQ7L1V2 547 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 CHSY1Q86X52 802 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 SLC30A5Q8TAD4 765 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 UCMAQ8WVF2 138 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 IQCDQ96DY2 449 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 MYEOVQ96EZ4 313 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 NUP58Q9BVL2 599 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 TSPY26PQ9H489 355 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 SEMA4GQ9NTN9 838 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 PIGVQ9NUD9 493 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 USP18Q9UMW8 372 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 PAXBP1Q9Y5B6 917 aa17.95■□□□□ 0.46
USP39-208ENST00000455732 SYNJ2BP-COX16A0A087WUM0 186 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 TCRBV21S2A2A0A5A6 115 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 TIMM44O43615 452 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 CALB1P05937 261 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 HOXB2P14652 356 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 TACR2P21452 398 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 WASP42768 502 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 RPS24P62847 133 aaKnown RBP17.94■□□□□ 0.46
USP39-208ENST00000455732 C1QBPQ07021 282 aaKnown RBP17.94■□□□□ 0.46
USP39-208ENST00000455732 ENPP2Q13822 863 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 ASIC2Q16515 512 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 CSRP2Q16527 193 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 TTC39BQ5VTQ0 682 aaPredicted RBP17.94■□□□□ 0.46
USP39-208ENST00000455732 SFMBT2Q5VUG0 894 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 E4F1Q66K89 784 aaPredicted RBP17.94■□□□□ 0.46
USP39-208ENST00000455732 RAP1GAP2Q684P5 730 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 TRNP1Q6NT89 227 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 CHPFQ8IZ52 775 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 AHI1Q8N157 1196 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 FIBINQ8TAL6 211 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 RNF34Q969K3 372 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 LMLNQ96KR4 655 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 METTL5Q9NRN9 209 aaKnown RBP17.94■□□□□ 0.46
USP39-208ENST00000455732 ELOVL2Q9NXB9 296 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 ARHGEF38Q9NXL2 777 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 DLL3Q9NYJ7 618 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 ADAM22Q9P0K1 906 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 COX16Q9P0S2 106 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 THAP10Q9P2Z0 257 aaPredicted RBP17.94■□□□□ 0.46
USP39-208ENST00000455732 GGA2Q9UJY4 613 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 INVSQ9Y283 1065 aa17.94■□□□□ 0.46
USP39-208ENST00000455732 MUC22E2RYF6 1773 aaPredicted RBP17.94■□□□□ 0.46
USP39-208ENST00000455732 FAM170AA1A519 330 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 F5H5T6 163 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 PABPC1P11940 636 aaKnown RBP17.93■□□□□ 0.46
USP39-208ENST00000455732 TFE3P19532 575 aaPredicted RBP17.93■□□□□ 0.46
USP39-208ENST00000455732 P2RY2P41231 377 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 LMNB2Q03252 620 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 ACBD5Q5T8D3 534 aaPredicted RBP17.93■□□□□ 0.46
USP39-208ENST00000455732 TMEM215Q68D42 235 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms