RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 FNIP1Q8TF40 1166 aa28.96■■■□□ 2.23
SMARCC1-203ENST00000454240 F5H5T6 163 aa28.95■■■□□ 2.22
SMARCC1-203ENST00000454240 CYP1A2P05177 515 aa28.95■■■□□ 2.22
SMARCC1-203ENST00000454240 RPS24P62847 133 aaKnown RBP28.95■■■□□ 2.22
SMARCC1-203ENST00000454240 AUHQ13825 339 aaKnown RBP28.95■■■□□ 2.22
SMARCC1-203ENST00000454240 MAMSTRQ6ZN01 415 aa28.95■■■□□ 2.22
SMARCC1-203ENST00000454240 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.95■■■□□ 2.22
SMARCC1-203ENST00000454240 C1orf74Q96LT6 269 aa28.95■■■□□ 2.22
SMARCC1-203ENST00000454240 HAPLN3Q96S86 360 aa28.95■■■□□ 2.22
SMARCC1-203ENST00000454240 TRIM7Q9C029 511 aa28.95■■■□□ 2.22
SMARCC1-203ENST00000454240 TMPRSS4Q9NRS4 437 aa28.95■■■□□ 2.22
SMARCC1-203ENST00000454240 IMPACTQ9P2X3 320 aa28.95■■■□□ 2.22
SMARCC1-203ENST00000454240 MYO18AQ92614 2054 aaKnown RBP28.94■■■□□ 2.22
SMARCC1-203ENST00000454240 TBC1D3BA6NDS4 549 aa28.94■■■□□ 2.22
SMARCC1-203ENST00000454240 RNF40O75150 1001 aa28.94■■■□□ 2.22
SMARCC1-203ENST00000454240 MTAPQ13126 283 aa28.94■■■□□ 2.22
SMARCC1-203ENST00000454240 ACBD5Q5T8D3 534 aaPredicted RBP28.94■■■□□ 2.22
SMARCC1-203ENST00000454240 FBXL22Q6P050 247 aa28.94■■■□□ 2.22
SMARCC1-203ENST00000454240 NUDT18Q6ZVK8 323 aa28.94■■■□□ 2.22
SMARCC1-203ENST00000454240 CFAP52Q8N1V2 620 aa28.94■■■□□ 2.22
SMARCC1-203ENST00000454240 SIK2Q9H0K1 926 aa28.94■■■□□ 2.22
SMARCC1-203ENST00000454240 SPTLC3Q9NUV7 552 aa28.94■■■□□ 2.22
SMARCC1-203ENST00000454240 CACNA1IQ9P0X4 2223 aa28.94■■■□□ 2.22
SMARCC1-203ENST00000454240 TYW5A2RUC4 315 aaKnown RBP28.93■■■□□ 2.22
SMARCC1-203ENST00000454240 FECHP22830 423 aa28.93■■■□□ 2.22
SMARCC1-203ENST00000454240 ADRA1BP35368 520 aa28.93■■■□□ 2.22
SMARCC1-203ENST00000454240 ZNF252P-AS1Q0IIN9 211 aa28.93■■■□□ 2.22
SMARCC1-203ENST00000454240 C5orf22Q49AR2 442 aa28.93■■■□□ 2.22
SMARCC1-203ENST00000454240 C14orf80Q86SX3 495 aa28.93■■■□□ 2.22
SMARCC1-203ENST00000454240 CCDC26Q8TAB7 109 aa28.93■■■□□ 2.22
SMARCC1-203ENST00000454240 ARHGEF26Q96DR7 871 aa28.93■■■□□ 2.22
SMARCC1-203ENST00000454240 STIM2Q9P246 746 aa28.93■■■□□ 2.22
SMARCC1-203ENST00000454240 DOCK4Q8N1I0 1966 aa28.93■■■□□ 2.22
SMARCC1-203ENST00000454240 ANTXRLA6NF34 631 aa28.92■■■□□ 2.22
SMARCC1-203ENST00000454240 CHURC1-FNTBB4DL54 471 aa28.92■■■□□ 2.22
SMARCC1-203ENST00000454240 GALR2O43603 387 aaPredicted RBP28.92■■■□□ 2.22
SMARCC1-203ENST00000454240 CHRM1P11229 460 aaPredicted RBP28.92■■■□□ 2.22
SMARCC1-203ENST00000454240 PSMA2P25787 234 aa28.92■■■□□ 2.22
SMARCC1-203ENST00000454240 C1orf210Q8IVY1 113 aa28.92■■■□□ 2.22
SMARCC1-203ENST00000454240 ZNF683Q8IZ20 524 aa28.92■■■□□ 2.22
SMARCC1-203ENST00000454240 SPEM1Q8N4L4 309 aa28.92■■■□□ 2.22
SMARCC1-203ENST00000454240 PACSIN1Q9BY11 444 aa28.92■■■□□ 2.22
SMARCC1-203ENST00000454240 VANGL2Q9ULK5 521 aa28.92■■■□□ 2.22
SMARCC1-203ENST00000454240 STARD13Q9Y3M8 1113 aa28.92■■■□□ 2.22
SMARCC1-203ENST00000454240 WDFY4Q6ZS81 3184 aa28.92■■■□□ 2.22
SMARCC1-203ENST00000454240 PRRT4C9JH25 899 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 H2AFZP0C0S5 128 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 DESP17661 470 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 GGCXP38435 758 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 KIR2DL1P43626 348 aaPredicted RBP28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 GEN1Q17RS7 908 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 ARL13BQ3SXY8 428 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 RABGAP1LQ5R372 815 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 C10orf76Q5T2E6 689 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 ARTNQ5T4W7 220 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 TTC39BQ5VTQ0 682 aaPredicted RBP28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 PKN3Q6P5Z2 889 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 H2AFVQ71UI9 128 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 KIAA0907Q7Z7F0 614 aaPredicted RBP28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 ZNF557Q8N988 423 aaPredicted RBP28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 FIBINQ8TAL6 211 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 WFDC5Q8TCV5 224 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 USP33Q8TEY7 942 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 IGSF8Q969P0 613 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 NTAN1Q96AB6 310 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 SPATA6Q9NWH7 488 aaPredicted RBP28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 SNX10Q9Y5X0 201 aa28.91■■■□□ 2.22
SMARCC1-203ENST00000454240 HLA-FP30511 346 aa28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 SEC13P55735 322 aa28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 MRPS21P82921 87 aaKnown RBP28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 CCDC170Q8IYT3 715 aa28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 ARFGAP1Q8N6T3 406 aa28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 CCDC185Q8N715 623 aa28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 DDX51Q8N8A6 666 aaKnown RBP eCLIP28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 SPC24Q8NBT2 197 aa28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 RPLP0P6Q8NHW5 317 aa28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 CTNNBL1Q8WYA6 563 aaPredicted RBP28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 RPRD1AQ96P16 312 aaPredicted RBP28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 PRRX2Q99811 253 aa28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 NUP85Q9BW27 656 aa28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 OSBPL2Q9H1P3 480 aa28.9■■■□□ 2.22
SMARCC1-203ENST00000454240 LUC7L3O95232 432 aaKnown RBP28.89■■■□□ 2.22
SMARCC1-203ENST00000454240 TMEM253P0C7T8 217 aa28.89■■■□□ 2.22
SMARCC1-203ENST00000454240 SCAPQ12770 1279 aa28.89■■■□□ 2.22
SMARCC1-203ENST00000454240 EMC10Q5UCC4 262 aa28.89■■■□□ 2.22
SMARCC1-203ENST00000454240 ANKS1BQ7Z6G8 1248 aa28.89■■■□□ 2.22
SMARCC1-203ENST00000454240 MFN1Q8IWA4 741 aa28.89■■■□□ 2.22
SMARCC1-203ENST00000454240 KCNV2Q8TDN2 545 aa28.89■■■□□ 2.22
SMARCC1-203ENST00000454240 LMLNQ96KR4 655 aa28.89■■■□□ 2.22
SMARCC1-203ENST00000454240 KCNH6Q9H252 994 aa28.89■■■□□ 2.22
SMARCC1-203ENST00000454240 HCN2Q9UL51 889 aa28.89■■■□□ 2.22
SMARCC1-203ENST00000454240 IGLV3-10A0A075B6K4 115 aa28.88■■■□□ 2.21
SMARCC1-203ENST00000454240 DRGXA6NNA5 263 aa28.88■■■□□ 2.21
SMARCC1-203ENST00000454240 ATG13O75143 517 aa28.88■■■□□ 2.21
SMARCC1-203ENST00000454240 LCA5LO95447 670 aa28.88■■■□□ 2.21
SMARCC1-203ENST00000454240 NRG1Q02297 640 aaPredicted RBP28.88■■■□□ 2.21
SMARCC1-203ENST00000454240 ACAP1Q15027 740 aa28.88■■■□□ 2.21
SMARCC1-203ENST00000454240 C2orf27AQ580R0 203 aa28.88■■■□□ 2.21
SMARCC1-203ENST00000454240 SCYL2Q6P3W7 929 aa28.88■■■□□ 2.21
SMARCC1-203ENST00000454240 SLFN11Q7Z7L1 901 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms