RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 IFNEQ86WN2 208 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 FBXO41Q8TF61 875 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 ERLEC1Q96DZ1 483 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 SEPT5Q99719 369 aaPredicted RBP11.48□□□□□ -0.57
DDR1-239ENST00000452441 PRDM12Q9H4Q4 367 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 ANLNQ9NQW6 1124 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 SCOCQ9UIL1 159 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 ITGA11Q9UKX5 1188 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 WASF2Q9Y6W5 498 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 CRCPO75575 148 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 CD4P01730 458 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 ITGAVP06756 1048 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 CSH1P0DML2 217 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 CSH2P0DML3 217 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 PTPN4P29074 926 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 PSEN2P49810 448 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 PIGZQ86VD9 579 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 SPATA24Q86W54 205 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 PCDH19Q8TAB3 1148 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 FSD1LQ9BXM9 530 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 RHOBTB2Q9BYZ6 727 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 SARS2Q9NP81 518 aaKnown RBP11.48□□□□□ -0.57
DDR1-239ENST00000452441 SLC24A2Q9UI40 661 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 MMP3P08254 477 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 ART3Q13508 389 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 BLMHQ13867 455 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 ARL13BQ3SXY8 428 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 PLEKHG4Q58EX7 1191 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 SH3D19Q5HYK7 790 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 SCG3Q8WXD2 468 aaKnown RBP11.47□□□□□ -0.57
DDR1-239ENST00000452441 INPP5DQ92835 1189 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 HDAC11Q96DB2 347 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 KCNK16Q96T55 309 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 WWP1Q9H0M0 922 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 FZD8Q9H461 694 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 ACSS3Q9H6R3 686 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 PLEKHA5Q9HAU0 1116 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 PCDH18Q9HCL0 1135 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 B4GALT4O60513 344 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 OR4Q2P0C623 313 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 GARSP41250 739 aaKnown RBP11.47□□□□□ -0.57
DDR1-239ENST00000452441 ZNF143P52747 638 aaPredicted RBP11.47□□□□□ -0.57
DDR1-239ENST00000452441 PKNOX1P55347 436 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 MFSD14CQ5VZR4 134 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 UNC5AQ6ZN44 842 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 RINLQ6ZS11 566 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 LRRC43Q8N309 656 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 MAML3Q96JK9 1138 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 APBA2Q99767 749 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 CYP3A43Q9HB55 503 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 NDE1Q9NXR1 346 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 GLTPD2A6NH11 291 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 CILPO75339 1184 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 BDNFP23560 247 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 HIC1Q14526 733 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 FSCN1Q16658 493 aaKnown RBP11.47□□□□□ -0.57
DDR1-239ENST00000452441 DCAF4L1Q3SXM0 396 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 SV2CQ496J9 727 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 NOL9Q5SY16 702 aaKnown RBP11.47□□□□□ -0.57
DDR1-239ENST00000452441 DEFB128Q7Z7B8 93 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 ARFGAP1Q8N6T3 406 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 GSTCDQ8NEC7 633 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 NPLOC4Q8TAT6 608 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 PHF21BQ96EK2 531 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 TSC22D3Q99576 134 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 NRDE2Q9H7Z3 1164 aa11.47□□□□□ -0.57
DDR1-239ENST00000452441 TYROBPO43914 113 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 APOEP02649 317 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 BRCC3P46736 316 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 CPT1AP50416 773 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 NUDT2P50583 147 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 BCAT1P54687 386 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 SLC6A3Q01959 620 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 RPS6KA2Q15349 733 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 TARBP2Q15633 366 aaKnown RBP11.46□□□□□ -0.57
DDR1-239ENST00000452441 BTBD8Q5XKL5 378 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 RELL1Q8IUW5 271 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 DEFB107AQ8IZN7 70 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 GSDMBQ8TAX9 411 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 HTR3CQ8WXA8 447 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 BEGAINQ9BUH8 593 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 NUF2Q9BZD4 464 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 PIF1Q9H611 641 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 WDR55Q9H6Y2 383 aaPredicted RBP11.46□□□□□ -0.57
DDR1-239ENST00000452441 PEX1O43933 1283 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 WFS1O76024 890 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 PIRTP0C851 137 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 NELFEP18615 380 aaKnown RBP11.46□□□□□ -0.57
DDR1-239ENST00000452441 PBX3P40426 434 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 GPD2P43304 727 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 ZNF460Q14592 562 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 CYTH1Q15438 398 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 OASLQ15646 514 aaKnown RBP11.46□□□□□ -0.57
DDR1-239ENST00000452441 MGAT5BQ3V5L5 792 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 DUSP28Q4G0W2 176 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 SLC45A4Q5BKX6 768 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 CERCAMQ5T4B2 595 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 IZUMO2Q6UXV1 221 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 TTC30AQ86WT1 665 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 ZSCAN18Q8TBC5 510 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms