RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CCDC117Q8IWD4 279 aaPredicted RBP10.04□□□□□ -0.8
USP54-207ENST00000451492 AHI1Q8N157 1196 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 AOPEPQ8N6M6 819 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 ENOX1Q8TC92 643 aaKnown RBP10.04□□□□□ -0.8
USP54-207ENST00000451492 WFIKKN2Q8TEU8 576 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 STK32AQ8WU08 396 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 MRGPRX1Q96LB2 322 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 HSPA12BQ96MM6 686 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 RTKNQ9BST9 563 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 TRIM62Q9BVG3 475 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 SLC2A11Q9BYW1 496 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 MKRN2Q9H000 416 aaKnown RBP10.04□□□□□ -0.8
USP54-207ENST00000451492 PRDM16Q9HAZ2 1276 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 ANO10Q9NW15 660 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 STOML2Q9UJZ1 356 aa10.04□□□□□ -0.8
USP54-207ENST00000451492 PI4KAP42356 2102 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 LNP1A1A4G5 178 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 MEI4A8MW99 385 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 F5H5T6 163 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 GFRA2O00451 464 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 SLC30A4O14863 429 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 HSF2BPO75031 334 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 DAB1O75553 588 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 MBD3O95983 291 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 CFIP05156 583 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 ACADMP11310 421 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 POLR2EP19388 210 aaKnown RBP10.03□□□□□ -0.8
USP54-207ENST00000451492 ABCB4P21439 1286 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 TACR2P21452 398 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 MAPK8P45983 427 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 SULT1E1P49888 294 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 COPB1P53618 953 aaKnown RBP10.03□□□□□ -0.8
USP54-207ENST00000451492 POLR2FP61218 127 aaKnown RBP10.03□□□□□ -0.8
USP54-207ENST00000451492 CDK17Q00537 523 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 MYL5Q02045 173 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 CENPCQ03188 943 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 NNTQ13423 1086 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 EIF4HQ15056 248 aaKnown RBP10.03□□□□□ -0.8
USP54-207ENST00000451492 UAP1L1Q3KQV9 507 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 TRIM61Q5EBN2 209 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 MS4A13Q5J8X5 152 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 PPM1JQ5JR12 505 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 EFHC1Q5JVL4 640 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 FAM102AQ5T9C2 384 aaPredicted RBP10.03□□□□□ -0.8
USP54-207ENST00000451492 STPG1Q5TH74 334 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 OLFML1Q6UWY5 402 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 RBM43Q6ZSC3 357 aaKnown RBP10.03□□□□□ -0.8
USP54-207ENST00000451492 ADIPOR2Q86V24 386 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 FAM71AQ8IYT1 594 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 RGL4Q8IZJ4 473 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 ATP6V0D2Q8N8Y2 350 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 TMEM35BQ8NCS4 154 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 SLC20A1Q8WUM9 679 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 SIPA1Q96FS4 1042 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 SLC39A13Q96H72 371 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 SPAG5Q96R06 1193 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 DDX50Q9BQ39 737 aaKnown RBP10.03□□□□□ -0.8
USP54-207ENST00000451492 GANQ9H2C0 597 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 LHX5Q9H2C1 402 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 MTG2Q9H4K7 406 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 CD248Q9HCU0 757 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 TMEM74BQ9NUR3 256 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 TMEM63CQ9P1W3 806 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 PCDH15Q96QU1 1955 aa10.03□□□□□ -0.8
USP54-207ENST00000451492 CEP250Q9BV73 2442 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 C4orf47A7E2U8 309 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 M0QYT0 321 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 KHNYNO15037 678 aaKnown RBP10.02□□□□□ -0.81
USP54-207ENST00000451492 EPHB6O15197 1021 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 ZNF217O75362 1048 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 LUC7L3O95232 432 aaKnown RBP10.02□□□□□ -0.81
USP54-207ENST00000451492 IGLV3-25P01717 112 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 TFE3P19532 575 aaPredicted RBP10.02□□□□□ -0.81
USP54-207ENST00000451492 CDK11BP21127 795 aaKnown RBP10.02□□□□□ -0.81
USP54-207ENST00000451492 CSKP41240 450 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 CTSOP43234 321 aaPredicted RBP10.02□□□□□ -0.81
USP54-207ENST00000451492 COPAP53621 1224 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 BPIFB4P59827 614 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 SLC6A3Q01959 620 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 TYRO3Q06418 890 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 ZNF33AQ06730 810 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 SYCP1Q15431 976 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 ANO6Q4KMQ2 910 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 FSCBQ5H9T9 825 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 CT47A1Q5JQC4 288 aaPredicted RBP10.02□□□□□ -0.81
USP54-207ENST00000451492 PITRM1Q5JRX3 1037 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 NAA35Q5VZE5 725 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 CAVIN1Q6NZI2 390 aaKnown RBP10.02□□□□□ -0.81
USP54-207ENST00000451492 SLC36A4Q6YBV0 504 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 PHLDB2Q86SQ0 1253 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 TMPRSS6Q8IU80 811 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 SLC41A1Q8IVJ1 513 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 ANKRD20A12PQ8NF67 263 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 EPS8L1Q8TE68 723 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 CPA5Q8WXQ8 436 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 SNX19Q92543 992 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 PRCCQ92733 491 aaPredicted RBP10.02□□□□□ -0.81
USP54-207ENST00000451492 BTN2A3PQ96KV6 586 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 SLC2A13Q96QE2 648 aa10.02□□□□□ -0.81
USP54-207ENST00000451492 GTPBP2Q9BX10 602 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms