RNA–Protein interactions for RNA: ENST00000450743.5

UBE2D4-207, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-207ENST00000450743 ZNF557Q8N988 423 aaPredicted RBP21.15■□□□□ 0.98
UBE2D4-207ENST00000450743 TMEM35BQ8NCS4 154 aa21.15■□□□□ 0.98
UBE2D4-207ENST00000450743 FIBINQ8TAL6 211 aa21.15■□□□□ 0.98
UBE2D4-207ENST00000450743 DDX1Q92499 740 aaKnown RBP21.15■□□□□ 0.98
UBE2D4-207ENST00000450743 BTN2A3PQ96KV6 586 aa21.15■□□□□ 0.98
UBE2D4-207ENST00000450743 FAM204AQ9H8W3 233 aa21.15■□□□□ 0.98
UBE2D4-207ENST00000450743 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.15■□□□□ 0.98
UBE2D4-207ENST00000450743 CYP8B1Q9UNU6 501 aa21.15■□□□□ 0.98
UBE2D4-207ENST00000450743 LAMA1P25391 3075 aa21.14■□□□□ 0.98
UBE2D4-207ENST00000450743 SYNCRIPO60506 623 aaKnown RBP21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 PTGER3P43115 390 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 KLK7P49862 253 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 COPB1P53618 953 aaKnown RBP21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 LIMK1P53667 647 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 RPL6Q02878 288 aaKnown RBP21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 FKBP15Q5T1M5 1219 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 TAF3Q5VWG9 929 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 MBLAC2Q68D91 279 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 KIAA1324Q6UXG2 1013 aaKnown RBP21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 ARMCX6Q7L4S7 300 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 CFAP52Q8N1V2 620 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 CYB5D2Q8WUJ1 264 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 PIGKQ92643 395 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 LMLNQ96KR4 655 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 MKRN2Q9H000 416 aaKnown RBP21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 PRDM16Q9HAZ2 1276 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 DDIT4Q9NX09 232 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 PLA2G4CQ9UP65 541 aa21.14■□□□□ 0.97
UBE2D4-207ENST00000450743 DCDC2BA2VCK2 349 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 KCNU1A8MYU2 1149 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 AP5Z1O43299 807 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 DAB1O75553 588 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 EPHX1P07099 455 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 SLC2A3P11169 496 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 TACR2P21452 398 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 RAP1GAP2Q684P5 730 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 NOP9Q86U38 636 aaKnown RBP21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 METTL3Q86U44 580 aaKnown RBP21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 CHSY1Q86X52 802 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 TMPRSS6Q8IU80 811 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 ZDHHC17Q8IUH5 632 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 LGI2Q8N0V4 545 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 CARNMT1Q8N4J0 409 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 ATP6V0D2Q8N8Y2 350 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 ZNF397Q8NF99 534 aaPredicted RBP21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 TMEM245Q9H330 911 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 CD93Q9NPY3 652 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 FAM207AQ9NSI2 230 aaPredicted RBP21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 TMEM63CQ9P1W3 806 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 LIMA1Q9UHB6 759 aaKnown RBP21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 SLC12A6Q9UHW9 1150 aa21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 ASCC3Q8N3C0 2202 aaKnown RBP21.13■□□□□ 0.97
UBE2D4-207ENST00000450743 CACNA1EQ15878 2313 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 NYNRINQ9P2P1 1898 aaKnown RBP21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 SYNJ2BP-COX16A0A087WUM0 186 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 ATP5BP06576 529 aaKnown RBP21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 DLDP09622 509 aaKnown RBP21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 HLA-EP13747 358 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 POLR2EP19388 210 aaKnown RBP21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 CCR1P32246 355 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 NOS2P35228 1153 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 GABRB2P47870 512 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 POLR2FP61218 127 aaKnown RBP21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 LMAN2Q12907 356 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 PTPRNQ16849 979 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 FNDC3BQ53EP0 1204 aaKnown RBP21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 LYSMD4Q5XG99 296 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 SYT12Q8IV01 421 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 DEFB119Q8N690 84 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 ANKRD20A12PQ8NF67 263 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 EPS8L1Q8TE68 723 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 C18orf8Q96DM3 657 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 COX16Q9P0S2 106 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 SIK3Q9Y2K2 1263 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 DOCK4Q8N1I0 1966 aa21.12■□□□□ 0.97
UBE2D4-207ENST00000450743 NCOR2Q9Y618 2525 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 PATE3B3GLJ2 98 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 KHNYNO15037 678 aaKnown RBP21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 GFPT2O94808 682 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 LUC7L3O95232 432 aaKnown RBP21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 LSM8O95777 96 aaKnown RBP21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 ABCB4P21439 1286 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 COPAP53621 1224 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 TYRO3Q06418 890 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 CAMK2GQ13555 558 aaPredicted RBP21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 CDH18Q13634 790 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 NCAPHQ15003 741 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 FSCBQ5H9T9 825 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 STPG1Q5TH74 334 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 ERICH1Q86X53 443 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 CCDC117Q8IWD4 279 aaPredicted RBP21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 RNF34Q969K3 372 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 TTC17Q96AE7 1141 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 SIPA1Q96FS4 1042 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 PRMT1Q99873 361 aaKnown RBP21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 NLRC4Q9NPP4 1024 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 ITM2CQ9NQX7 267 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 TMEM74BQ9NUR3 256 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 DAAM1Q9Y4D1 1078 aa21.11■□□□□ 0.97
UBE2D4-207ENST00000450743 MED19A0JLT2 244 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms