RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 MS4A13Q5J8X5 152 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 PPM1JQ5JR12 505 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 LYSMD4Q5XG99 296 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 RAP1GAP2Q684P5 730 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 MBLAC2Q68D91 279 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 SDE2Q6IQ49 451 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 OLFML1Q6UWY5 402 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 LPCAT2Q7L5N7 544 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 CIR1Q86X95 450 aaPredicted RBP11.28□□□□□ -0.6
SF3A1-203ENST00000444440 UNC45BQ8IWX7 931 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 GOLGA1Q92805 767 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 AZIN2Q96A70 460 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 PPP1R13BQ96KQ4 1090 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 FAM81BQ96LP2 452 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 PRMT1Q99873 361 aaKnown RBP11.28□□□□□ -0.6
SF3A1-203ENST00000444440 VPS16Q9H269 839 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 GANQ9H2C0 597 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 LHX5Q9H2C1 402 aa11.28□□□□□ -0.6
SF3A1-203ENST00000444440 PTPRBP23467 1997 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 SYNJ2BP-COX16A0A087WUM0 186 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 C4orf47A7E2U8 309 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 I6L893 689 aaPredicted RBP11.27□□□□□ -0.61
SF3A1-203ENST00000444440 PES1O00541 588 aaKnown RBP11.27□□□□□ -0.61
SF3A1-203ENST00000444440 CAPN9O14815 690 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 SART1O43290 800 aaKnown RBP11.27□□□□□ -0.61
SF3A1-203ENST00000444440 EPHX1P07099 455 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 UCHL3P15374 230 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 TACR2P21452 398 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 CTSOP43234 321 aaPredicted RBP11.27□□□□□ -0.61
SF3A1-203ENST00000444440 ZNF445P59923 1031 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 PTK2Q05397 1052 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 ZNF33AQ06730 810 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 CAMK2GQ13555 558 aaPredicted RBP11.27□□□□□ -0.61
SF3A1-203ENST00000444440 FNDC3BQ53EP0 1204 aaKnown RBP11.27□□□□□ -0.61
SF3A1-203ENST00000444440 TRIM61Q5EBN2 209 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 TAF3Q5VWG9 929 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 OR6B2Q6IFH4 312 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 TRNP1Q6NT89 227 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 SASS6Q6UVJ0 657 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 SERPINA13PQ6UXR4 307 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 NOP9Q86U38 636 aaKnown RBP11.27□□□□□ -0.61
SF3A1-203ENST00000444440 TMPRSS6Q8IU80 811 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 LGI2Q8N0V4 545 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 AHI1Q8N157 1196 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 HJURPQ8NCD3 748 aaPredicted RBP11.27□□□□□ -0.61
SF3A1-203ENST00000444440 ENOX1Q8TC92 643 aaKnown RBP11.27□□□□□ -0.61
SF3A1-203ENST00000444440 UCMAQ8WVF2 138 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 MRGPRX3Q96LB0 322 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 HSPA12BQ96MM6 686 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 HSD3B7Q9H2F3 369 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 PRDM16Q9HAZ2 1276 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 ANLNQ9NQW6 1124 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 COX16Q9P0S2 106 aa11.27□□□□□ -0.61
SF3A1-203ENST00000444440 KCNU1A8MYU2 1149 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 F8VZ95 297 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 GIPC1O14908 333 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 KHNYNO15037 678 aaKnown RBP11.26□□□□□ -0.61
SF3A1-203ENST00000444440 NPC1O15118 1278 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 AP5Z1O43299 807 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 FOXD2O60548 495 aaPredicted RBP11.26□□□□□ -0.61
SF3A1-203ENST00000444440 LUC7L3O95232 432 aaKnown RBP11.26□□□□□ -0.61
SF3A1-203ENST00000444440 CYP11B1P15538 503 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 MAOBP27338 520 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 CDH5P33151 784 aaPredicted RBP11.26□□□□□ -0.61
SF3A1-203ENST00000444440 CSKP41240 450 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 TPMTP51580 245 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 BYSLQ13895 437 aaKnown RBP11.26□□□□□ -0.61
SF3A1-203ENST00000444440 STARD3Q14849 445 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 MPP7Q5T2T1 576 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 ARTNQ5T4W7 220 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 SLC36A4Q6YBV0 504 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 CHSY1Q86X52 802 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 SYT12Q8IV01 421 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 MFN1Q8IWA4 741 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 APCDD1Q8J025 514 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 CARNMT1Q8N4J0 409 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 OR52K2Q8NGK3 314 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 OR2I1PQ8NGU4 316 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 FIBINQ8TAL6 211 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 WFIKKN2Q8TEU8 576 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 SLC20A1Q8WUM9 679 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 TOE1Q96GM8 510 aaKnown RBP11.26□□□□□ -0.61
SF3A1-203ENST00000444440 ZNF419Q96HQ0 510 aaPredicted RBP11.26□□□□□ -0.61
SF3A1-203ENST00000444440 PRSS16Q9NQE7 514 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 ITM2CQ9NQX7 267 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 TMPRSS4Q9NRS4 437 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 FANCLQ9NW38 375 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 WSB2Q9NYS7 404 aaPredicted RBP11.26□□□□□ -0.61
SF3A1-203ENST00000444440 EVLQ9UI08 416 aaPredicted RBP11.26□□□□□ -0.61
SF3A1-203ENST00000444440 SIK3Q9Y2K2 1263 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 SLCO1B1Q9Y6L6 691 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 ANKRD36A6QL64 1941 aa11.26□□□□□ -0.61
SF3A1-203ENST00000444440 KNL1Q8NG31 2342 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 TIMM44O43615 452 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 HSF2BPO75031 334 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 ZNF217O75362 1048 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 DAB1O75553 588 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 IGLV3-19P01714 112 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 APOEP02649 317 aa11.25□□□□□ -0.61
SF3A1-203ENST00000444440 MMEP08473 750 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms