RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 KCTD15Q96SI1 283 aaPredicted RBP14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 RNPEPL1Q9HAU8 725 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 TMPRSS4Q9NRS4 437 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 SPATS2LQ9NUQ6 558 aaKnown RBP14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 MTMR10Q9NXD2 777 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 ZC3H7BQ9UGR2 993 aaKnown RBP14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 BCLAF3A2AJT9 711 aaKnown RBP14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 INPPL1O15357 1258 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 B4GALT3O60512 393 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 METTL18O95568 372 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 EOMESO95936 686 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 GOT1P17174 413 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 CALB2P22676 271 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 PTPN9P43378 593 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 CCNG1P51959 295 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 DPYSL2Q16555 572 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 KCNT2Q6UVM3 1135 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 RGS9BPQ6ZS82 235 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 OTOAQ7RTW8 1153 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 SLC44A1Q8WWI5 657 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 PCED1BQ96HM7 432 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 UROC1Q96N76 676 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 RTP3Q9BQQ7 232 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 C11orf84Q9BUA3 381 aaPredicted RBP14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 TBC1D10AQ9BXI6 508 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 IQANK1A0A1B0GTG1 560 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 CFAP69A5D8W1 941 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 CXorf49A8MYA2 514 aaPredicted RBP14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 LPXNO60711 386 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 NBNO60934 754 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 FAM200BP0CF97 657 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 PYGBP11216 843 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 AMPD1P23109 780 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 RABGGTBP53611 331 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 MAP3K7CLP57077 242 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 PITX1P78337 314 aaPredicted RBP14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 OVGP1Q12889 678 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 FAM35AQ86V20 835 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 LONP2Q86WA8 852 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 ZNF280BQ86YH2 543 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 CSPG4P5Q96PW8 444 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 NUDCD1Q96RS6 583 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 BEGAINQ9BUH8 593 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 POPDC2Q9HBU9 364 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 NPHS2Q9NP85 383 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 CDH9Q9ULB4 789 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 MAD1L1Q9Y6D9 718 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 ZNF638Q14966 1978 aaKnown RBP14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 PCSK1P29120 753 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 GRIA1P42261 906 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 SESN3P58005 492 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 FAM189BP81408 668 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 SARNPP82979 210 aaKnown RBP14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 BFSP2Q13515 415 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 VPS52Q8N1B4 723 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 RSPH1Q8WYR4 309 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 PTPRN2Q92932 1015 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 FAM111AQ96PZ2 611 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 RNF208Q9H0X6 261 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 SSU72Q9NP77 194 aaKnown RBP14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 TTLL3Q9Y4R7 772 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 LRRC42Q9Y546 428 aa14.3□□□□□ -0.12
PTCHD3-201ENST00000438700 TET1Q8NFU7 2136 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 UGT1A9O60656 530 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 PQBP1O60828 265 aaKnown RBP14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 DDHD2O94830 711 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 SCNN1AP37088 669 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 GPNMBQ14956 572 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 DCAF6Q58WW2 860 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 SLC45A4Q5BKX6 768 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 NOMO2Q5JPE7 1267 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 METTL23Q86XA0 190 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 CDKL3Q8IVW4 592 aaPredicted RBP14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 DEFB106AQ8N104 65 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 MPP5Q8N3R9 675 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 CENPIQ92674 756 aaPredicted RBP14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 LRRC37BQ96QE4 947 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 FTHL17Q9BXU8 183 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 DENND2DQ9H6A0 471 aaPredicted RBP14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 UGT1A7Q9HAW7 530 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 UGT1A10Q9HAW8 530 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 UGT1A8Q9HAW9 530 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 PLAC1Q9HBJ0 212 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 TMEM30AQ9NV96 361 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 DTLQ9NZJ0 730 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 DCTN4Q9UJW0 460 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 M0QZQ0 153 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 TM9SF1O15321 606 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 CYP11A1P05108 521 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 CCL5P13501 91 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 TSHRP16473 764 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 PTDSS1P48651 473 aaKnown RBP14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 NDUFV1P49821 464 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 SULT1E1P49888 294 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 CACNA2D1P54289 1103 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 SETDB1Q15047 1291 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 NCBP2-AS2Q69YL0 99 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 RFWD3Q6PCD5 774 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 DCLRE1AQ6PJP8 1040 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms