RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 HBS1LQ9Y450 684 aaKnown RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 YDJCA8MPS7 323 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 SYCE1LA8MT33 242 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ZBBXA8MT70 800 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 CYB561D2O14569 222 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 PLSCR1O15162 318 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 LYPLA1O75608 230 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 TMEM63AO94886 807 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 COX4I1P13073 169 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 CRHR1P34998 444 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 GRIK1P39086 918 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 NAGLUP54802 743 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 LBRQ14739 615 aaKnown RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 SPRED3Q2MJR0 410 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 RHBDF2Q6PJF5 856 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 MARK2Q7KZI7 788 aaKnown RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 TMC7Q7Z402 723 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 SPATA2LQ8IUW3 424 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 GPRC5AQ8NFJ5 357 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ZNF526Q8TF50 670 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 USP6NLQ92738 828 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 RMDN1Q96DB5 314 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 L3MBTL3Q96JM7 780 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 PRDM16Q9HAZ2 1276 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 AAASQ9NRG9 546 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ZNF180Q9UJW8 692 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 TRHDEQ9UKU6 1024 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 UBDO15205 165 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ZMPSTE24O75844 475 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 CFHP08603 1231 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 RBP1P09455 135 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 MAP4P27816 1152 aaKnown RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ABCG1P45844 678 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 MAP3K7CLP57077 242 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 CSHL1Q14406 222 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 POU6F1Q14863 301 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 AASDHQ4L235 1098 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 PACS1Q6VY07 963 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 RINLQ6ZS11 566 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ZBTB49Q6ZSB9 765 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 UNC93AQ86WB7 457 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ERO1BQ86YB8 467 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ZNF786Q8N393 782 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 SHCBP1Q8NEM2 672 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 OR52K1Q8NGK4 314 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ULK4Q96C45 1275 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ZFRQ96KR1 1074 aaKnown RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 BRD8Q9H0E9 1235 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ADAM7Q9H2U9 754 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 PRDM12Q9H4Q4 367 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 TBC1D23Q9NUY8 699 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 MORF4L1Q9UBU8 362 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 LNPEPQ9UIQ6 1025 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 HEATR9A2RTY3 570 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ERI2A8K979 691 aaKnown RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 EDIL3O43854 480 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 SUPT3HO75486 399 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 CETPP11597 493 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 TCF4P15884 667 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 SP100P23497 879 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 RPL14P50914 215 aaKnown RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 CCNHP51946 323 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ARHGDIAP52565 204 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 PKNOX1P55347 436 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ACSBG2Q5FVE4 666 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 TXNRD3NBQ6F5E7 133 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 SLC39A4Q6P5W5 647 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 SLC27A1Q6PCB7 646 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 RFWD3Q6PCD5 774 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 TTC7BQ86TV6 843 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 RELL1Q8IUW5 271 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 PSTKQ8IV42 348 aaKnown RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 C12orf29Q8N999 325 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 NAT8LQ8N9F0 302 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 RIN3Q8TB24 985 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 SLC16A10Q8TF71 515 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 SERAC1Q96JX3 654 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 CLPTM1LQ96KA5 538 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 OSMRQ99650 979 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 APBA2Q99767 749 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 NIFKQ9BYG3 293 aaKnown RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 COPS7BQ9H9Q2 264 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-205ENST00000438362 ADAM28Q9UKQ2 775 aa6.84□□□□□ -1.31
CSDE1-205ENST00000438362 GOLGA8TH3BQL2 631 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 PHGDHO43175 533 aaKnown RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 NDUFS3O75489 264 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 CCDC130P13994 396 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 PSMA4P25789 261 aaKnown RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 SOX11P35716 441 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 ALDH1A3P47895 512 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 CD151P48509 253 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 CHN2P52757 468 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 KCNK10P57789 538 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 SNAPC2Q13487 334 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 PDK3Q15120 406 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 RBBP7Q16576 425 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 IMPG1Q17R60 797 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 C6orf10Q5SRN2 563 aa6.83□□□□□ -1.32
CSDE1-205ENST00000438362 CELF3Q5SZQ8 465 aaKnown RBP6.83□□□□□ -1.32
CSDE1-205ENST00000438362 SCARA3Q6AZY7 606 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms