RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 WSB2Q9NYS7 404 aaPredicted RBP18.2■□□□□ 0.5
SBDSP1-203ENST00000437201 STIM2Q9P246 746 aa18.2■□□□□ 0.5
SBDSP1-203ENST00000437201 TJP2Q9UDY2 1190 aa18.2■□□□□ 0.5
SBDSP1-203ENST00000437201 DNAJC12Q9UKB3 198 aa18.2■□□□□ 0.5
SBDSP1-203ENST00000437201 ATXN2Q99700 1313 aaKnown RBP18.2■□□□□ 0.5
SBDSP1-203ENST00000437201 PES1O00541 588 aaKnown RBP18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 MOCS3O95396 460 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 TRUB2O95900 331 aaKnown RBP18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 IGLV3-19P01714 112 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 ASLP04424 464 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 CSRP1P21291 193 aaKnown RBP18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 NOVA1P51513 510 aaKnown RBP18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 TPMTP51580 245 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 SGSHP51688 502 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 COPAP53621 1224 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 ST8SIA6P61647 398 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 CDH18Q13634 790 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 UAP1L1Q3KQV9 507 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 DCAF6Q58WW2 860 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 MS4A13Q5J8X5 152 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 NADSYN1Q6IA69 706 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 SLC41A1Q8IVJ1 513 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 CYB5D2Q8WUJ1 264 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 ACP6Q9NPH0 428 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 CYTH4Q9UIA0 394 aa18.19■□□□□ 0.5
SBDSP1-203ENST00000437201 MEI4A8MW99 385 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 HSF2BPO75031 334 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 MOCS2O96007 188 aaPredicted RBP18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 CEACAM1P13688 526 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 ABCB4P21439 1286 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 CD70P32970 193 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 MAPK8P45983 427 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 APBA1Q02410 837 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 ZBTB16Q05516 673 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 N4BP2L1Q5TBK1 243 aaPredicted RBP18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 PSAPL1Q6NUJ1 521 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 C11orf57Q6ZUT1 292 aaPredicted RBP18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 CARNMT1Q8N4J0 409 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 HDDC3Q8N4P3 179 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 TTC17Q96AE7 1141 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 CPXM1Q96SM3 734 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 GPR174Q9BXC1 333 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 NUCKS1Q9H1E3 243 aaKnown RBP18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 PCED1AQ9H1Q7 454 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 PDCL3Q9H2J4 239 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 SLC32A1Q9H598 525 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 SYNCQ9H7C4 482 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 FAM204AQ9H8W3 233 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 CAPN10Q9HC96 672 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 SIX2Q9NPC8 291 aa18.18■□□□□ 0.5
SBDSP1-203ENST00000437201 H0Y626 953 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 FOXN3O00409 490 aaPredicted RBP18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 ARHGAP33O14559 1287 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 IGLV3-25P01717 112 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 HLA-EP13747 358 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 EEF1GP26641 437 aaKnown RBP18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 CCR1P32246 355 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 RPS24P62847 133 aaKnown RBP18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 SFSWAPQ12872 951 aaKnown RBP18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 PTPRNQ16849 979 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 ZC3H12AQ5D1E8 599 aaKnown RBP18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 SH3PXD2AQ5TCZ1 1133 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 CHSY1Q86X52 802 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 ZDHHC17Q8IUH5 632 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 FAM71AQ8IYT1 594 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 LGI2Q8N0V4 545 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 WDTC1Q8N5D0 677 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 KDM1BQ8NB78 822 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 RNF34Q969K3 372 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 PRICKLE1Q96MT3 831 aaPredicted RBP18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 PPP1R9BQ96SB3 815 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 GTPBP2Q9BX10 602 aaKnown RBP18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 ZDHHC5Q9C0B5 715 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 TMEM51Q9NW97 253 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 KIAA1522Q9P206 1035 aaPredicted RBP18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 ANGPTL2Q9UKU9 493 aa18.17■□□□□ 0.5
SBDSP1-203ENST00000437201 KCNU1A8MYU2 1149 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 KCNJ18B7U540 433 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 F5H5T6 163 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 OPHN1O60890 802 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 RNASEH1O60930 286 aaKnown RBP18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 LUC7L3O95232 432 aaKnown RBP18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 TPM2P07951 284 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 C7P10643 843 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 TACR2P21452 398 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 CLCN1P35523 988 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 OXCT1P55809 520 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 SLC12A1Q13621 1099 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 KCNJ12Q14500 433 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 PLEKHG6Q3KR16 790 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 TTC31Q49AM3 519 aaPredicted RBP18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 MIIPQ5JXC2 388 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 RABGAP1LQ5R372 815 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 TTC39BQ5VTQ0 682 aaPredicted RBP18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 OR6B2Q6IFH4 312 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 PASD1Q8IV76 773 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 DEFB106AQ8N104 65 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 C1orf131Q8NDD1 294 aaKnown RBP18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 WFDC5Q8TCV5 224 aa18.16■□□□□ 0.5
SBDSP1-203ENST00000437201 DNASE2BQ8WZ79 361 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms