RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 BBS9Q3SYG4 887 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 VPS37BQ9H9H4 285 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 CLIC5Q9NZA1 410 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 WDR27A2RRH5 827 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 TRIM43BA6NCK2 446 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 A6NNZ2 444 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 KCNU1A8MYU2 1149 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 RNF103O00237 685 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 NCAM2O15394 837 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 STK10O94804 968 aaKnown RBP27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 HTR7P34969 479 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 SERPINB6P35237 376 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 DEFB103AP81534 67 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 PKN2Q16513 984 aaKnown RBP27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 TUBB8Q3ZCM7 444 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 SYCP2LQ5T4T6 812 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 ATP11CQ8NB49 1132 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 CCNYQ8ND76 341 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 TRIM43Q96BQ3 446 aaPredicted RBP27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 TLR6Q9Y2C9 796 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 PTPRSQ13332 1948 aa27.4■■□□□ 1.98
SH3GL3-202ENST00000427482 KIAA0355O15063 1070 aa27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 TPSB2P20231 275 aa27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 PSEN1P49768 467 aa27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 GPX6P59796 221 aa27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 SEMA5AQ13591 1074 aa27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 TPSAB1Q15661 275 aa27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 MANEALQ5VSG8 457 aa27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 MCUQ8NE86 351 aa27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 FBXO36Q8NEA4 188 aa27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 SIK2Q9H0K1 926 aa27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 PRDM5Q9NQX1 630 aaPredicted RBP27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 LGALS13Q9UHV8 139 aa27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 SLC12A6Q9UHW9 1150 aa27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 KIAA1671Q9BY89 1806 aa27.39■■□□□ 1.98
SH3GL3-202ENST00000427482 E7EVH7 732 aa27.39■■□□□ 1.97
SH3GL3-202ENST00000427482 OPHN1O60890 802 aa27.39■■□□□ 1.97
SH3GL3-202ENST00000427482 APRTP07741 180 aa27.39■■□□□ 1.97
SH3GL3-202ENST00000427482 CSF2RAP15509 400 aa27.39■■□□□ 1.97
SH3GL3-202ENST00000427482 HOXC13P31276 330 aa27.39■■□□□ 1.97
SH3GL3-202ENST00000427482 PPIDQ08752 370 aaKnown RBP27.39■■□□□ 1.97
SH3GL3-202ENST00000427482 TAF10Q12962 218 aa27.39■■□□□ 1.97
SH3GL3-202ENST00000427482 SLC39A13Q96H72 371 aa27.39■■□□□ 1.97
SH3GL3-202ENST00000427482 BRD8Q9H0E9 1235 aa27.39■■□□□ 1.97
SH3GL3-202ENST00000427482 TLR8Q9NR97 1041 aaKnown RBP27.39■■□□□ 1.97
SH3GL3-202ENST00000427482 TSHRP16473 764 aa27.38■■□□□ 1.97
SH3GL3-202ENST00000427482 FDFT1P37268 417 aa27.38■■□□□ 1.97
SH3GL3-202ENST00000427482 GNGT1P63211 74 aa27.38■■□□□ 1.97
SH3GL3-202ENST00000427482 GALNT2Q10471 571 aa27.38■■□□□ 1.97
SH3GL3-202ENST00000427482 WASHC5Q12768 1159 aa27.38■■□□□ 1.97
SH3GL3-202ENST00000427482 CCDC38Q502W7 563 aa27.38■■□□□ 1.97
SH3GL3-202ENST00000427482 SPOUT1Q5T280 376 aaKnown RBP27.38■■□□□ 1.97
SH3GL3-202ENST00000427482 TMCO2Q7Z6W1 182 aaPredicted RBP27.38■■□□□ 1.97
SH3GL3-202ENST00000427482 ZNF558Q96NG5 402 aa27.38■■□□□ 1.97
SH3GL3-202ENST00000427482 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.38■■□□□ 1.97
SH3GL3-202ENST00000427482 EURLQ9NYK6 297 aa27.38■■□□□ 1.97
SH3GL3-202ENST00000427482 CTNNAL1Q9UBT7 734 aa27.38■■□□□ 1.97
SH3GL3-202ENST00000427482 KIAA0100Q14667 2235 aaKnown RBP27.38■■□□□ 1.97
SH3GL3-202ENST00000427482 EXOC1LA0A1B0GW35 172 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 CDH16O75309 829 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 SRGAP2BP0DMP2 458 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 RPL17P18621 184 aaKnown RBP27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 ATF6P18850 670 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 MX2P20592 715 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 OR1D2P34982 312 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 WDR5P61964 334 aaKnown RBP27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 MTM1Q13496 603 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 ARTNQ5T4W7 220 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 CAPN12Q6ZSI9 719 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 SLC39A11Q8N1S5 342 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 HDAC11Q96DB2 347 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 FCRL2Q96LA5 508 aaPredicted RBP27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 OLA1Q9NTK5 396 aaKnown RBP27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 TEX264Q9Y6I9 313 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 EFCAB14O75071 495 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 SOD2P04179 222 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 PHBP35232 272 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 MDH1P40925 334 aaKnown RBP27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 IRAK1P51617 712 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 NRG1Q02297 640 aaPredicted RBP27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 KIAA1841Q6NSI8 718 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 FAM117BQ6P1L5 589 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 ZNF771Q7L3S4 317 aaPredicted RBP27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 NECAB2Q7Z6G3 386 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 CAND1Q86VP6 1230 aaKnown RBP27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 RIBC1Q8N443 379 aaPredicted RBP27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 CEP295NLQ96MC4 621 aa27.37■■□□□ 1.97
SH3GL3-202ENST00000427482 DOCK4Q8N1I0 1966 aa27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 SLC38A8A6NNN8 435 aa27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 SLC2A3P11169 496 aa27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 ATP5DP30049 168 aa27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 ELK3P41970 407 aa27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 TBX4P57082 545 aa27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 GUCY1A3Q02108 690 aa27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 RASIP1Q5U651 963 aa27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 TTC19Q6DKK2 380 aaPredicted RBP27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 RWDD4Q6NW29 188 aaKnown RBP27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 CMTR2Q8IYT2 770 aaKnown RBP27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 DNAJC5GQ8N7S2 189 aa27.36■■□□□ 1.97
SH3GL3-202ENST00000427482 COLGALT1Q8NBJ5 622 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms