RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 TCEAL1Q15170 157 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 SLFN11Q7Z7L1 901 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 RHOT2Q8IXI1 618 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 CFAP52Q8N1V2 620 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 NIPA2Q8N8Q9 360 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 HJURPQ8NCD3 748 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-209ENST00000425836 ACRBPQ8NEB7 543 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 RFFLQ8WZ73 363 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 PNKPQ96T60 521 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 MAGEB5Q9BZ81 275 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 DNAJC17Q9NVM6 304 aaKnown RBP25.31■■□□□ 1.64
VEGFA-209ENST00000425836 TRIM24O15164 1050 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 MIPP30301 263 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 SCAPQ12770 1279 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 ACBD5Q5T8D3 534 aaPredicted RBP25.31■■□□□ 1.64
VEGFA-209ENST00000425836 RNF43Q68DV7 783 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 FSTL4Q6MZW2 842 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 PHTF2Q8N3S3 785 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 IGSF8Q969P0 613 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 EXOC4Q96A65 974 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 DEC1Q9P2X7 70 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 VANGL2Q9ULK5 521 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.3■■□□□ 1.64
VEGFA-209ENST00000425836 GPR37L1O60883 481 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 MTA2O94776 668 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 CISD3P0C7P0 127 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 PCK1P35558 622 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 GRSF1Q12849 480 aaKnown RBP eCLIP25.3■■□□□ 1.64
VEGFA-209ENST00000425836 FZD5Q13467 585 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 ARTNQ5T4W7 220 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 DAB2IPQ5VWQ8 1189 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 ZNF683Q8IZ20 524 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 CCDC112Q8NEF3 446 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 PJA1Q8NG27 643 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 NCAPGQ9BPX3 1015 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 OSBPL6Q9BZF3 934 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 OSBPL2Q9H1P3 480 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 STIM2Q9P246 746 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 PCSK1NQ9UHG2 260 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 FZD10Q9ULW2 581 aa25.3■■□□□ 1.64
VEGFA-209ENST00000425836 RCCD1A6NED2 376 aa25.29■■□□□ 1.64
VEGFA-209ENST00000425836 PDLIM2Q96JY6 352 aa25.29■■□□□ 1.64
VEGFA-209ENST00000425836 RPRD1AQ96P16 312 aaPredicted RBP25.29■■□□□ 1.64
VEGFA-209ENST00000425836 PEBP4Q96S96 227 aa25.29■■□□□ 1.64
VEGFA-209ENST00000425836 DESI2Q9BSY9 194 aa25.29■■□□□ 1.64
VEGFA-209ENST00000425836 ARHGEF4Q9NR80 690 aa25.29■■□□□ 1.64
VEGFA-209ENST00000425836 SIT1Q9Y3P8 196 aa25.29■■□□□ 1.64
VEGFA-209ENST00000425836 PI15O43692 258 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 PROSCO94903 275 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 CHRNB1P11230 501 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 DRD1P21728 446 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 DGKGP49619 791 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 AIF1P55008 147 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 KRT83P78385 493 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 KDSRQ06136 332 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 C5orf22Q49AR2 442 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 RABGAP1LQ5R372 815 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 ASTLQ6HA08 431 aaPredicted RBP25.28■■□□□ 1.64
VEGFA-209ENST00000425836 GRAMD4Q6IC98 578 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 SUGP1Q8IWZ8 645 aaKnown RBP25.28■■□□□ 1.64
VEGFA-209ENST00000425836 CCDC105Q8IYK2 499 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 EZH1Q92800 747 aaPredicted RBP25.28■■□□□ 1.64
VEGFA-209ENST00000425836 C1QTNF1Q9BXJ1 281 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 SLC2A11Q9BYW1 496 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 OR12D3Q9UGF7 316 aa25.28■■□□□ 1.64
VEGFA-209ENST00000425836 A0A0A0MRY4 1105 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 TYW5A2RUC4 315 aaKnown RBP25.27■■□□□ 1.64
VEGFA-209ENST00000425836 E9PAM4 449 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 ARHGAP6O43182 974 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 PRPSAP2O60256 369 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 KAT7O95251 611 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 EGFP01133 1207 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 AOC1P19801 751 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 GRIA2P42262 883 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 IRAK1P51617 712 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 CLCN5P51795 746 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 CCINQ13939 588 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 EFHC2Q5JST6 749 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 LRRC31Q6UY01 552 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 CYP4V2Q6ZWL3 525 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-209ENST00000425836 CIR1Q86X95 450 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-209ENST00000425836 FBXL6Q8N531 539 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 LMAN1LQ9HAT1 526 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 LCMT1Q9UIC8 334 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 USP18Q9UMW8 372 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 DRGXA6NNA5 263 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 FAM72CH0Y354 149 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 SRGAP2O75044 1071 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 APODP05090 189 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 TCF4P15884 667 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 VAV2P52735 878 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 CCZ1BP86790 482 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 CCZ1P86791 482 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-209ENST00000425836 NRG1Q02297 640 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-209ENST00000425836 TMEM31Q5JXX7 168 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 FAM72AQ5TYM5 149 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 TTC39BQ5VTQ0 682 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-209ENST00000425836 FAM72DQ6L9T8 149 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 FAM72BQ86X60 149 aa25.27■■□□□ 1.64
VEGFA-209ENST00000425836 CPNE8Q86YQ8 564 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms