RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 RNF103O00237 685 aa27.3■■□□□ 1.96
LDB1-202ENST00000425280 TIMP1P01033 207 aa27.3■■□□□ 1.96
LDB1-202ENST00000425280 IRAK1P51617 712 aa27.3■■□□□ 1.96
LDB1-202ENST00000425280 DEFB103AP81534 67 aa27.3■■□□□ 1.96
LDB1-202ENST00000425280 CBLBQ13191 982 aa27.3■■□□□ 1.96
LDB1-202ENST00000425280 SLC8B1Q6J4K2 584 aa27.3■■□□□ 1.96
LDB1-202ENST00000425280 TRIM43Q96BQ3 446 aaPredicted RBP27.3■■□□□ 1.96
LDB1-202ENST00000425280 ZNF689Q96CS4 500 aaPredicted RBP27.3■■□□□ 1.96
LDB1-202ENST00000425280 WDR27A2RRH5 827 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 KCNU1A8MYU2 1149 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 E7EVH7 732 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 SRGAP2BP0DMP2 458 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 CSF2RAP15509 400 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 RPL17P18621 184 aaKnown RBP27.29■■□□□ 1.96
LDB1-202ENST00000425280 GUCY1A3Q02108 690 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 PSMD5Q16401 504 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 ATP11CQ8NB49 1132 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 FRMD8Q9BZ67 464 aaPredicted RBP27.29■■□□□ 1.96
LDB1-202ENST00000425280 BACE2Q9Y5Z0 518 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 STK10O94804 968 aaKnown RBP27.29■■□□□ 1.96
LDB1-202ENST00000425280 MDH1P40925 334 aaKnown RBP27.29■■□□□ 1.96
LDB1-202ENST00000425280 WASHC5Q12768 1159 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 TAF10Q12962 218 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 SEMA5AQ13591 1074 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 FAM117BQ6P1L5 589 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 IGDCC3Q8IVU1 814 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 MCUQ8NE86 351 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 FERMT1Q9BQL6 677 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 PRDM5Q9NQX1 630 aaPredicted RBP27.29■■□□□ 1.96
LDB1-202ENST00000425280 SEPT10Q9P0V9 454 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 LGALS13Q9UHV8 139 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 TLR6Q9Y2C9 796 aa27.29■■□□□ 1.96
LDB1-202ENST00000425280 EXOC1LA0A1B0GW35 172 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 A6NNZ2 444 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 NCAM2O15394 837 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 AVILO75366 819 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 TPSB2P20231 275 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 RPL10AP62906 217 aaKnown RBP27.28■■□□□ 1.96
LDB1-202ENST00000425280 PPARDQ03181 441 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 DMTNQ08495 405 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 TPSAB1Q15661 275 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 TUBB8Q3ZCM7 444 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 SPOUT1Q5T280 376 aaKnown RBP27.28■■□□□ 1.96
LDB1-202ENST00000425280 ARTNQ5T4W7 220 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 MANEALQ5VSG8 457 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 CAND1Q86VP6 1230 aaKnown RBP27.28■■□□□ 1.96
LDB1-202ENST00000425280 FCRL2Q96LA5 508 aaPredicted RBP27.28■■□□□ 1.96
LDB1-202ENST00000425280 RC3H2Q9HBD1 1191 aaKnown RBP27.28■■□□□ 1.96
LDB1-202ENST00000425280 COMMD8Q9NX08 183 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 EURLQ9NYK6 297 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 CLIC5Q9NZA1 410 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 OPHN1O60890 802 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 CDH16O75309 829 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 GCAP28676 217 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 SSTR1P30872 391 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 OR1D2P34982 312 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 SERPINB6P35237 376 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 ELK3P41970 407 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 CCDC38Q502W7 563 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 RASIP1Q5U651 963 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 RWDD4Q6NW29 188 aaKnown RBP27.28■■□□□ 1.96
LDB1-202ENST00000425280 AGGF1Q8N302 714 aaeCLIP27.28■■□□□ 1.961e-7■■■■□ 20.7
LDB1-202ENST00000425280 GIPC2Q8TF65 315 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 SLC39A13Q96H72 371 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 CEP41Q9BYV8 373 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.28■■□□□ 1.96
LDB1-202ENST00000425280 TMEM51Q9NW97 253 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 CHMP2BQ9UQN3 213 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 TEX264Q9Y6I9 313 aa27.28■■□□□ 1.96
LDB1-202ENST00000425280 HSPA8P11142 646 aaKnown RBP27.27■■□□□ 1.96
LDB1-202ENST00000425280 ATF6P18850 670 aa27.27■■□□□ 1.96
LDB1-202ENST00000425280 FDFT1P37268 417 aa27.27■■□□□ 1.96
LDB1-202ENST00000425280 PPIDQ08752 370 aaKnown RBP27.27■■□□□ 1.96
LDB1-202ENST00000425280 GALNT2Q10471 571 aa27.27■■□□□ 1.96
LDB1-202ENST00000425280 COLGALT1Q8NBJ5 622 aa27.27■■□□□ 1.96
LDB1-202ENST00000425280 TLR8Q9NR97 1041 aaKnown RBP27.27■■□□□ 1.96
LDB1-202ENST00000425280 MOCS2O96007 188 aaPredicted RBP27.26■■□□□ 1.95
LDB1-202ENST00000425280 HOXC13P31276 330 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 MMP13P45452 471 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 KIAA1841Q6NSI8 718 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 C3orf62Q6ZUJ4 267 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 EXOC3L1Q86VI1 746 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 PALM2Q8IXS6 379 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 CYP4X1Q8N118 509 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 ZNF567Q8N184 647 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 BRD8Q9H0E9 1235 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 PCDH10Q9P2E7 1040 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 C2CD2LO14523 706 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 KIAA0355O15063 1070 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 TSHRP16473 764 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 MX2P20592 715 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 HTR7P34969 479 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 PHBP35232 272 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 PSEN1P49768 467 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 WDR5P61964 334 aaKnown RBP27.26■■□□□ 1.95
LDB1-202ENST00000425280 EFEMP1Q12805 493 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 HDAC11Q96DB2 347 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 ZNF558Q96NG5 402 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 RABGEF1Q9UJ41 708 aa27.26■■□□□ 1.95
LDB1-202ENST00000425280 HS3ST4Q9Y661 456 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms