RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 ARL13BQ3SXY8 428 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 ANKRD20A8PQ5CZ79 823 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 MICALCLQ6ZW33 695 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 BBS12Q6ZW61 710 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 PSTKQ8IV42 348 aaKnown RBP15.5■□□□□ 0.07
CALD1-206ENST00000424922 MRPL43Q8N983 215 aaKnown RBP15.5■□□□□ 0.07
CALD1-206ENST00000424922 NTAN1Q96AB6 310 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 RNF157Q96PX1 679 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 EMILIN2Q9BXX0 1053 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 TKTL2Q9H0I9 626 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 CDC42EP4Q9H3Q1 356 aaKnown RBP15.5■□□□□ 0.07
CALD1-206ENST00000424922 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.5■□□□□ 0.07
CALD1-206ENST00000424922 MAFFQ9ULX9 164 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 DRG1Q9Y295 367 aaKnown RBP15.5■□□□□ 0.07
CALD1-206ENST00000424922 ATG2AQ2TAZ0 1938 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 PDE4DIPQ5VU43 2346 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 RASGRF2O14827 1237 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 GRM6O15303 877 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 TBX18O95935 607 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 ZDHHC11BP0C7U3 371 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 ADCY8P40145 1251 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 PBX2P40425 430 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 EPHB3P54753 998 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 UBE3AQ05086 875 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 EFEMP1Q12805 493 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 EIF4EBP2Q13542 120 aaPredicted RBP15.5■□□□□ 0.07
CALD1-206ENST00000424922 VEPH1Q14D04 833 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.5■□□□□ 0.07
CALD1-206ENST00000424922 ZNF512Q96ME7 567 aaPredicted RBP15.5■□□□□ 0.07
CALD1-206ENST00000424922 ZNF670Q9BS34 389 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 YBX2Q9Y2T7 364 aaKnown RBP15.5■□□□□ 0.07
CALD1-206ENST00000424922 PCDHA11Q9Y5I1 949 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 FAM169AQ9Y6X4 670 aa15.5■□□□□ 0.07
CALD1-206ENST00000424922 E7EVH7 732 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 NDC80O14777 642 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 LIASO43766 372 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 TCEA3O75764 348 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 RB1P06400 928 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 GOT1P17174 413 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 AIF1P55008 147 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 SCAPQ12770 1279 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 C10orf120Q5SQS8 335 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 MSANTD2Q6P1R3 559 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 LILRA6Q6PI73 481 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 VSIG1Q86XK7 387 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 PCDH19Q8TAB3 1148 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 SERPINB11Q96P15 392 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 SERPINB12Q96P63 405 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 TGS1Q96RS0 853 aaKnown RBP15.49■□□□□ 0.07
CALD1-206ENST00000424922 CCSER2Q9H7U1 834 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 C5orf60A6NFR6 353 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 CREB3O43889 395 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 TTC4O95801 387 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 IRS1P35568 1242 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 ARL4AP40617 200 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 SEC24CP53992 1094 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 PLD1Q13393 1074 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 AUHQ13825 339 aaKnown RBP15.49■□□□□ 0.07
CALD1-206ENST00000424922 CAMK1Q14012 370 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 TFDP2Q14188 446 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 DNAJB7Q7Z6W7 309 aaPredicted RBP15.49■□□□□ 0.07
CALD1-206ENST00000424922 CCDC25Q86WR0 208 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 PQLC3Q8N755 202 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 MYRFLQ96LU7 910 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 FRMD8P1Q9BZ68 369 aaPredicted RBP15.49■□□□□ 0.07
CALD1-206ENST00000424922 RASSF4Q9H2L5 321 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 RABEP2Q9H5N1 569 aa15.49■□□□□ 0.07
CALD1-206ENST00000424922 OLA1Q9NTK5 396 aaKnown RBP15.49■□□□□ 0.07
CALD1-206ENST00000424922 TLDC2A0PJX2 215 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 TLR5O60602 858 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 LPXNO60711 386 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 CCR1P32246 355 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 CHKAP35790 457 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 MAGEA9P43362 315 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 OTUD4Q01804 1114 aaKnown RBP15.48■□□□□ 0.07
CALD1-206ENST00000424922 YTHDF3Q7Z739 585 aaKnown RBP15.48■□□□□ 0.07
CALD1-206ENST00000424922 MIB1Q86YT6 1006 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 PDZD8Q8NEN9 1154 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 ACTL9Q8TC94 416 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 FAF2Q96CS3 445 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 CSPG4P5Q96PW8 444 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 CERS4Q9HA82 394 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 PPANQ9NQ55 473 aaKnown RBP15.48■□□□□ 0.07
CALD1-206ENST00000424922 DONSONQ9NYP3 566 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 DNPEPQ9ULA0 475 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 TLR6Q9Y2C9 796 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 TRANK1O15050 2925 aa15.48■□□□□ 0.07
CALD1-206ENST00000424922 DOCK4Q8N1I0 1966 aa15.47■□□□□ 0.07
CALD1-206ENST00000424922 ZNF840PA6NDX5 716 aa15.47■□□□□ 0.07
CALD1-206ENST00000424922 ZNF487B1APH4 448 aa15.47■□□□□ 0.07
CALD1-206ENST00000424922 FAM72CH0Y354 149 aa15.47■□□□□ 0.07
CALD1-206ENST00000424922 APOC4-APOC2K7ER74 178 aa15.47■□□□□ 0.07
CALD1-206ENST00000424922 APOL1O14791 398 aa15.47■□□□□ 0.07
CALD1-206ENST00000424922 GLUD1P00367 558 aa15.47■□□□□ 0.07
CALD1-206ENST00000424922 APOC2P02655 101 aa15.47■□□□□ 0.07
CALD1-206ENST00000424922 PECAM1P16284 738 aaPredicted RBP15.47■□□□□ 0.07
CALD1-206ENST00000424922 FAM72AQ5TYM5 149 aa15.47■□□□□ 0.07
CALD1-206ENST00000424922 IZUMO3Q5VZ72 239 aa15.47■□□□□ 0.07
CALD1-206ENST00000424922 FAM72DQ6L9T8 149 aa15.47■□□□□ 0.07
CALD1-206ENST00000424922 HIBCHQ6NVY1 386 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms