RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 COL1A2P08123 1366 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 ZSWIM8A7E2V4 1837 aa12.28□□□□□ -0.44
PTPRN-204ENST00000423636 ENTPD5O75356 428 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 CD1EP15812 388 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 DESP17661 470 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 PTPN7P35236 360 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 GRIK1P39086 918 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 ALDH18A1P54886 795 aaKnown RBP12.27□□□□□ -0.44
PTPRN-204ENST00000423636 MAXP61244 160 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 ZBTB17Q13105 803 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 SLC25A52Q3SY17 297 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 ZNF280DQ6N043 979 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 CIR1Q86X95 450 aaPredicted RBP12.27□□□□□ -0.44
PTPRN-204ENST00000423636 MIB1Q86YT6 1006 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 IFNL1Q8IU54 200 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 KCNN1Q92952 543 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 ZNF669Q96BR6 464 aaPredicted RBP12.27□□□□□ -0.44
PTPRN-204ENST00000423636 FCRL3Q96P31 734 aaPredicted RBP12.27□□□□□ -0.44
PTPRN-204ENST00000423636 EBF4Q9BQW3 602 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 MAN1C1Q9NR34 630 aa12.27□□□□□ -0.44
PTPRN-204ENST00000423636 GOLGA8CPA6NN73 597 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 ITM2AO43736 263 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 TCEA3O75764 348 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 ZMPSTE24O75844 475 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 ATP6V1G2O95670 118 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 SERPINB4P48594 390 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 ITIH4Q14624 930 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 DPYSL2Q16555 572 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 CRYBG2Q8N1P7 616 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 UTP4Q969X6 686 aaKnown RBP12.27□□□□□ -0.45
PTPRN-204ENST00000423636 CLPTM1LQ96KA5 538 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 RILPQ96NA2 401 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 TMEM120AQ9BXJ8 343 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 WDCPQ9H6R7 721 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 ARL8BQ9NVJ2 186 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 OR12D3Q9UGF7 316 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 ZFP69BQ9UJL9 534 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 KIAA1257Q9ULG3 409 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 IQANK1A0A1B0GTG1 560 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 MEI4A8MW99 385 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 TPP1O14773 563 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 APOEP02649 317 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 SLC4A1P02730 911 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 RGS2P41220 211 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 IRF9Q00978 393 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 BST1Q10588 318 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 POU6F1Q14863 301 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 SETDB1Q15047 1291 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 ICE2Q659A1 982 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 ATG14Q6ZNE5 492 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 SAPCD2Q86UD0 394 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 SLC26A11Q86WA9 606 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 POU5F2Q8N7G0 328 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 DTX3LQ8TDB6 740 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 SGF29Q96ES7 293 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 PPP1R10Q96QC0 940 aaKnown RBP12.27□□□□□ -0.45
PTPRN-204ENST00000423636 NCAPGQ9BPX3 1015 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 XPNPEP3Q9NQH7 507 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 DNAJB4Q9UDY4 337 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 PRKAG3Q9UGI9 489 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 FIS1Q9Y3D6 152 aa12.27□□□□□ -0.45
PTPRN-204ENST00000423636 PMPCBO75439 489 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 OR1G1P47890 313 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 WASHC5Q12768 1159 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 ZNF467Q7Z7K2 595 aaPredicted RBP12.26□□□□□ -0.45
PTPRN-204ENST00000423636 NAT14Q8WUY8 206 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 BHMTQ93088 406 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 ZNF670Q9BS34 389 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 BRD8Q9H0E9 1235 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 CCDC134Q9H6E4 229 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 ACTR5Q9H9F9 607 aaPredicted RBP12.26□□□□□ -0.45
PTPRN-204ENST00000423636 RXFP1Q9HBX9 757 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 NKX1-2Q9UD57 310 aaPredicted RBP12.26□□□□□ -0.45
PTPRN-204ENST00000423636 SLC24A2Q9UI40 661 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 ANKRD12Q6UB98 2062 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 E7ESA3 106 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 XPO1O14980 1071 aaKnown RBP12.26□□□□□ -0.45
PTPRN-204ENST00000423636 RFPL1O75677 317 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 LRIG2O94898 1065 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 ENO1P06733 434 aaKnown RBP12.26□□□□□ -0.45
PTPRN-204ENST00000423636 AKR1A1P14550 325 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 NFKB1P19838 968 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 CHRNA4P43681 627 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 BNIP1Q12981 228 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 C17orf99Q6UX52 265 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 TAC4Q86UU9 113 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 LONP2Q86WA8 852 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 UNC93AQ86WB7 457 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 NUDCD3Q8IVD9 361 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 SLC25A41Q8N5S1 370 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 T-ENOLP0DO92 83 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
PTPRN-204ENST00000423636 TGM2P21980 687 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 ADRA1BP35368 520 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 ITKQ08881 620 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 EFHC1Q5JVL4 640 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 RPS27LQ71UM5 84 aaKnown RBP12.26□□□□□ -0.45
PTPRN-204ENST00000423636 RELL1Q8IUW5 271 aa12.26□□□□□ -0.45
PTPRN-204ENST00000423636 CDKL3Q8IVW4 592 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms