RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 MTIF2P46199 727 aaKnown RBP11.46□□□□□ -0.57
SSBP3-206ENST00000420121 SLC11A2P49281 568 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 TPMTP51580 245 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 RPS24P62847 133 aaKnown RBP11.46□□□□□ -0.57
SSBP3-206ENST00000420121 YWHAZP63104 245 aaKnown RBP11.46□□□□□ -0.57
SSBP3-206ENST00000420121 KCNMA1Q12791 1236 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 STARD3Q14849 445 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 MAN2A1Q16706 1144 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 MS4A13Q5J8X5 152 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 MBLAC2Q68D91 279 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 SMYD5Q6GMV2 418 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 SERPINA13PQ6UXR4 307 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 CREBRFQ8IUR6 639 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 ZNF366Q8N895 744 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 FIBINQ8TAL6 211 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 GOLGA1Q92805 767 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 FAM81BQ96LP2 452 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 HSPA12BQ96MM6 686 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 CNTNAP3BQ96NU0 1288 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 CNTNAP3Q9BZ76 1288 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 NUP62CLQ9H1M0 184 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 POPDC2Q9HBU9 364 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 DNAJC12Q9UKB3 198 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 DOCK4Q8N1I0 1966 aa11.46□□□□□ -0.58
SSBP3-206ENST00000420121 PLXNA2O75051 1894 aa11.46□□□□□ -0.58
SSBP3-206ENST00000420121 TRUB2O95900 331 aaKnown RBP11.45□□□□□ -0.58
SSBP3-206ENST00000420121 SERPINF2P08697 491 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 CD6P30203 668 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 USP8P40818 1118 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 DPP6P42658 865 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 LMAN2Q12907 356 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 DUOXA1Q1HG43 343 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 VWA3BQ502W6 1294 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 HSP90AA4PQ58FG1 418 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 ZC3H12AQ5D1E8 599 aaKnown RBP11.45□□□□□ -0.58
SSBP3-206ENST00000420121 FSCBQ5H9T9 825 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 OTUD1Q5VV17 481 aaPredicted RBP11.45□□□□□ -0.58
SSBP3-206ENST00000420121 PSAPL1Q6NUJ1 521 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 OLFML1Q6UWY5 402 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 MMS22LQ6ZRQ5 1243 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 SLC47A2Q86VL8 602 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 PASD1Q8IV76 773 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 FAM71AQ8IYT1 594 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 AHI1Q8N157 1196 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 HJURPQ8NCD3 748 aaPredicted RBP11.45□□□□□ -0.58
SSBP3-206ENST00000420121 OR2T3Q8NH03 318 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 DNASE2BQ8WZ79 361 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 TTC17Q96AE7 1141 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 SIPA1Q96FS4 1042 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 TOE1Q96GM8 510 aaKnown RBP11.45□□□□□ -0.58
SSBP3-206ENST00000420121 MRGPRX3Q96LB0 322 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 SLC2A13Q96QE2 648 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 PRMT1Q99873 361 aaKnown RBP11.45□□□□□ -0.58
SSBP3-206ENST00000420121 ADAM33Q9BZ11 813 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 LHX5Q9H2C1 402 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 NDST4Q9H3R1 872 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 PRSS16Q9NQE7 514 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 SAMSN1Q9NSI8 373 aaKnown RBP11.45□□□□□ -0.58
SSBP3-206ENST00000420121 STIM2Q9P246 746 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 SLC6A14Q9UN76 642 aa11.45□□□□□ -0.58
SSBP3-206ENST00000420121 KNL1Q8NG31 2342 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 KCNU1A8MYU2 1149 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 ZBTB24O43167 697 aaPredicted RBP11.44□□□□□ -0.58
SSBP3-206ENST00000420121 SYNCRIPO60506 623 aaKnown RBP11.44□□□□□ -0.58
SSBP3-206ENST00000420121 MOCS2O96007 188 aaPredicted RBP11.44□□□□□ -0.58
SSBP3-206ENST00000420121 ERBB2P04626 1255 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 DLDP09622 509 aaKnown RBP11.44□□□□□ -0.58
SSBP3-206ENST00000420121 CSRP1P21291 193 aaKnown RBP11.44□□□□□ -0.58
SSBP3-206ENST00000420121 MAOBP27338 520 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 E2F5Q15329 346 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 PTPN20Q4JDL3 420 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 DCAF6Q58WW2 860 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 DAB2IPQ5VWQ8 1189 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 FAM183BPQ6ZVS7 135 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 CACUL1Q86Y37 369 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 MFN1Q8IWA4 741 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 DEFB106AQ8N104 65 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 CFAP52Q8N1V2 620 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 C1orf131Q8NDD1 294 aaKnown RBP11.44□□□□□ -0.58
SSBP3-206ENST00000420121 OR2I1PQ8NGU4 316 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 C1orf216Q8TAB5 229 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 PPP1R13BQ96KQ4 1090 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 TUBGCP2Q9BSJ2 902 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 GPR174Q9BXC1 333 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 NAA15Q9BXJ9 866 aaKnown RBP11.44□□□□□ -0.58
SSBP3-206ENST00000420121 NUSAP1Q9BXS6 441 aaKnown RBP11.44□□□□□ -0.58
SSBP3-206ENST00000420121 MTG2Q9H4K7 406 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 ASNSD1Q9NWL6 643 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 WASF3Q9UPY6 502 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 FHOD1Q9Y613 1164 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 SLCO1B1Q9Y6L6 691 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 CACNA1BQ00975 2339 aa11.44□□□□□ -0.58
SSBP3-206ENST00000420121 CAPN9O14815 690 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 GJB3O75712 270 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 LUC7L3O95232 432 aaKnown RBP11.43□□□□□ -0.58
SSBP3-206ENST00000420121 CFIP05156 583 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 GLI1P08151 1106 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 TACR2P21452 398 aa11.43□□□□□ -0.58
SSBP3-206ENST00000420121 CDH5P33151 784 aaPredicted RBP11.43□□□□□ -0.58
SSBP3-206ENST00000420121 CSKP41240 450 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms